TSS: Hg 102689.1: Difference between revisions
From referenceTSS
(Created page with "{{TSSDetail |cpg_percent=0.125 |distance_to_tss=-199 |entrez_id=100616335 |gc_percent=0.676617 |gene_alias=MIR2964A|hsa-mir-219b|mir-219b |gene_description=microRNA 219b |gene...") |
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{{TSSDetail | {{TSSDetail | ||
|all_trans=AY882313:-228 LG005857:-228 LG053553:-228 LG051691:-289 | |||
|chr=chr9 | |||
|cpg_percent=0.125 | |cpg_percent=0.125 | ||
|distance=-228 | |||
|distance_to_tss=-199 | |distance_to_tss=-199 | ||
|end=128392425 | |||
|entrez_id=100616335 | |entrez_id=100616335 | ||
|gc_percent=0.676617 | |gc_percent=0.676617 | ||
| Line 8: | Line 12: | ||
|gene_name=MIR219B | |gene_name=MIR219B | ||
|gene_type=ncRNA | |gene_type=ncRNA | ||
|hsa-mir-219b= | |||
|mir-219b= | |||
|nearest_ensembl=ENSG00000283335 | |nearest_ensembl=ENSG00000283335 | ||
|nearest_promoter_id=NR_039815 | |nearest_promoter_id=NR_039815 | ||
|nearest_refseq=NR_039815 | |nearest_refseq=NR_039815 | ||
|nearest_unigene= | |nearest_unigene= | ||
|num_trans=4 | |||
|species=human | |||
|start=128392419 | |||
|strand=- | |||
|transcript_name=AY882313 LG005857 LG053553 | |||
|tss_classification=yes | |||
|tss_id=hg_102689.1 | |tss_id=hg_102689.1 | ||
|tss_score=1 | |||
}} | }} | ||
Revision as of 19:37, 8 March 2018
Basic information about the TSS
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| TSS cluster detected* |
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* The number of TSS cluster called studies (maximum 16)
Gene and protein annotation
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TATA-Box annotation
| Distance to TSS: | -199 |
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| Nearest PromoterID: | NR_039815 |
| Entrez ID: | 100616335 |
| Nearest Unigene: | |
| Nearest Refseq: | NR_039815 |
| Nearest Ensembl: | ENSG00000283335 |
| Gene Name: | MIR219B |
| Gene Alias: | MIR2964A |
| Gene Description: | microRNA 219b |
| Gene Type: | ncRNA |
| CpG%: | 0.125 |
| GC%: | 0.676617 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |