TSS: Hg 102702.1: Difference between revisions
From referenceTSS
(Created page with "{{TSSDetail |cpg_percent=0.1 |distance_to_tss=18 |entrez_id=84885 |gc_percent=0.756219 |gene_alias=DHHC-12|ZNF400 |gene_description=zinc finger DHHC-type containing 12 |gene_n...") |
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{{TSSDetail | {{TSSDetail | ||
|ZNF400= | |||
|all_trans=ENST00000372663.8:0 ENST00000372667.9:0 ENST00000467312.1:0 ENST00000452105.5:0 ENST00000406904.2:0 NM_001318016:0 NM_032799:0 NM_001318015:0 NM_001318020:0 NM_001318023:0 uc004bvy.4:0 uc064wgo.1:0 uc033dim.2:0 uc064wgp.1:0 uc064wgq.1:0 BC009280:0 BC048251:0 AK027430:0 AK075332:0 AK092843:0 AK315746:0 HQ448571:0 KJ903475:0 CU690564:0 | |||
|chr=chr9 | |||
|cpg_percent=0.1 | |cpg_percent=0.1 | ||
|distance=0 | |||
|distance_to_tss=18 | |distance_to_tss=18 | ||
|end=128724134 | |||
|entrez_id=84885 | |entrez_id=84885 | ||
|gc_percent=0.756219 | |gc_percent=0.756219 | ||
|gene_alias=DHHC-12|ZNF400 | |gene_alias=DHHC-12|ZNF400 | ||
|gene_description=zinc finger DHHC-type containing 12 | |gene_description=zinc finger DHHC-type containing 12 | ||
|gene_name=ZDHHC12 | |gene_id=84885 | ||
|gene_name=zinc finger DHHC-type containing 12 | |||
|gene_source=HGNC:19159 | |||
|gene_symbol=ZDHHC12 | |||
|gene_synonyms=FLJ14524 ZNF400 | |||
|gene_type=protein-coding | |gene_type=protein-coding | ||
|hgnc_mgi_id=HGNC:19159 | |||
|nearest_ensembl=ENSG00000160446 | |nearest_ensembl=ENSG00000160446 | ||
|nearest_promoter_id=NM_001318023 | |nearest_promoter_id=NM_001318023 | ||
|nearest_refseq=NM_032799 | |nearest_refseq=NM_032799 | ||
|nearest_unigene=Hs.133122 | |nearest_unigene=Hs.133122 | ||
|num_trans=24 | |||
|species=human | |||
|start=128724088 | |||
|strand=- | |||
|transcript_name=ENST00000372663.8 ENST00000372667.9 ENST00000467312.1 ENST00000452105.5 ENST00000406904.2 NM_001318016 NM_032799 NM_001318015 NM_001318020 NM_001318023 uc004bvy.4 uc064wgo.1 uc033dim.2 uc064wgp.1 uc064wgq.1 BC009280 BC048251 AK027430 AK075332 AK092843 AK315746 HQ448571 KJ903475 CU690564 | |||
|tss_classification=yes | |||
|tss_id=hg_102702.1 | |tss_id=hg_102702.1 | ||
|tss_score=1 | |||
|uniprot_id=Q5T266 Q5T269 Q96GR4 X6RBN4 | |||
}} | }} | ||
Revision as of 19:37, 8 March 2018
Basic information about the TSS
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| TSS cluster detected* |
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* The number of TSS cluster called studies (maximum 16)
Gene and protein annotation
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TATA-Box annotation
| Distance to TSS: | 18 |
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| Nearest PromoterID: | NM_001318023 |
| Entrez ID: | 84885 |
| Nearest Unigene: | Hs.133122 |
| Nearest Refseq: | NM_032799 |
| Nearest Ensembl: | ENSG00000160446 |
| Gene Name: | zinc finger DHHC-type containing 12 |
| Gene Alias: | DHHC-12 |
| Gene Description: | zinc finger DHHC-type containing 12 |
| Gene Type: | protein-coding |
| CpG%: | 0.1 |
| GC%: | 0.756219 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
TSS expression
Expression data not found.