TSS: Hg 102725.1: Difference between revisions
From referenceTSS
(Created page with "{{TSSDetail |cpg_percent=0.05 |distance_to_tss=8399 |entrez_id=1384 |gc_percent=0.656716 |gene_alias=CAT|CAT1 |gene_description=carnitine O-acetyltransferase |gene_name=CRAT |...") |
No edit summary |
||
| Line 1: | Line 1: | ||
{{TSSDetail | {{TSSDetail | ||
|CAT1= | |||
|chr=chr9 | |||
|cpg_percent=0.05 | |cpg_percent=0.05 | ||
|distance= | |||
|distance_to_tss=8399 | |distance_to_tss=8399 | ||
|end=129102401 | |||
|entrez_id=1384 | |entrez_id=1384 | ||
|gc_percent=0.656716 | |gc_percent=0.656716 | ||
| Line 12: | Line 16: | ||
|nearest_refseq=NM_000755 | |nearest_refseq=NM_000755 | ||
|nearest_unigene=Hs.12068 | |nearest_unigene=Hs.12068 | ||
|num_trans=0 | |||
|species=human | |||
|start=129102396 | |||
|strand=- | |||
|transcript_name= | |||
|tss_classification=no | |||
|tss_id=hg_102725.1 | |tss_id=hg_102725.1 | ||
|tss_score=1 | |||
}} | }} | ||
Revision as of 19:38, 8 March 2018
Basic information about the TSS
|
| |||||||||||||
| TSS cluster detected* |
|---|
* The number of TSS cluster called studies (maximum 16)
Gene and protein annotation
|
|
TATA-Box annotation
| Distance to TSS: | 8399 |
|---|---|
| Nearest PromoterID: | NM_001346546 |
| Entrez ID: | 1384 |
| Nearest Unigene: | Hs.12068 |
| Nearest Refseq: | NM_000755 |
| Nearest Ensembl: | ENSG00000095321 |
| Gene Name: | CRAT |
| Gene Alias: | CAT |
| Gene Description: | carnitine O-acetyltransferase |
| Gene Type: | protein-coding |
| CpG%: | 0.05 |
| GC%: | 0.656716 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |