TSS: Rfhg 140712.1: Difference between revisions
From referenceTSS
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|gene_type=protein-coding | |gene_type=protein-coding | ||
|hgnc_mgi_id=HGNC:3793 | |hgnc_mgi_id=HGNC:3793 | ||
|methods=CAGE{{!}}TSS_database | |||
|nearest_ensembl=ENSG00000165457 | |nearest_ensembl=ENSG00000165457 | ||
|nearest_promoter_id=NM_001113534 | |nearest_promoter_id=NM_001113534 | ||
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|peak_score=1 | |peak_score=1 | ||
|reftss_version=4 | |reftss_version=4 | ||
|source_datasets=FANTOM5{{!}}EPD{{!}}ENCODE | |||
|species=human | |species=human | ||
|start=72216775 | |start=72216775 |
Revision as of 03:09, 7 December 2023
Basic information about the TSS
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Source datasets | FANTOM5|EPD|ENCODE | |||||||||||||
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Protocol | CAGE|TSS_database | |||||||||||||
TSS cluster detected* | 3 |
* The number of TSS cluster called data-sets (maximum 17)
cCREs annotation
Description: | - |
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Category: | - |
* cCREs are candidates for cis regulatory elements generated from the subset of representative DNase hypersensitivity sites supported by either histone modifications or CTCF-binding data. Find more details here.
Gene and protein annotation
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TATA-Box annotation
Distance to TSS: | -6 |
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Nearest PromoterID: | NM_001113534 |
Entrez ID: | 2350 |
Nearest Unigene: | Hs.433159 |
Nearest Refseq: | NM_000803 |
Nearest Ensembl: | ENSG00000165457 |
Gene Name: | FOLR2 |
Gene Alias: | BETA-HFR|FBP|FBP/PL-1|FR-BETA|FR-P3|FRbeta |
Gene Type: | protein-coding |
CpG%: | 0.076923 |
GC%: | 0.518519 |
TATA-Box(TBP)/Promoter/Homer Distance From Peak(sequence,strand,conservation): |
TSS expression
Expression data not found.