TSS: Hg 102755.1: Difference between revisions
From referenceTSS
(Created page with "{{TSSDetail |cpg_percent=0.01 |distance_to_tss=-9 |entrez_id=101929437 |gc_percent=0.462687 |gene_alias=- |gene_description=PRRX2 antisense RNA 1 |gene_name=PRRX2-AS1 |gene_ty...") |
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{{TSSDetail | {{TSSDetail | ||
|all_trans=NR_132102:4 ENST00000440413.1:75 uc064wlu.1:75 | |||
|chr=chr9 | |||
|cpg_percent=0.01 | |cpg_percent=0.01 | ||
|distance=4 | |||
|distance_to_tss=-9 | |distance_to_tss=-9 | ||
|end=129718720 | |||
|entrez_id=101929437 | |entrez_id=101929437 | ||
|gc_percent=0.462687 | |gc_percent=0.462687 | ||
|gene_alias=- | |gene_alias=- | ||
|gene_description=PRRX2 antisense RNA 1 | |gene_description=PRRX2 antisense RNA 1 | ||
|gene_name=PRRX2-AS1 | |gene_id=101929437 | ||
|gene_name=PRRX2 antisense RNA 1 | |||
|gene_source=HGNC:50684 | |||
|gene_symbol=PRRX2-AS1 | |||
|gene_synonyms= | |||
|gene_type=ncRNA | |gene_type=ncRNA | ||
|hgnc_mgi_id=HGNC:50684 | |||
|nearest_ensembl=ENSG00000236024 | |nearest_ensembl=ENSG00000236024 | ||
|nearest_promoter_id=NR_132102 | |nearest_promoter_id=NR_132102 | ||
|nearest_refseq=NR_132102 | |nearest_refseq=NR_132102 | ||
|nearest_unigene=Hs.112596 | |nearest_unigene=Hs.112596 | ||
|num_trans=3 | |||
|species=human | |||
|start=129718709 | |||
|strand=- | |||
|transcript_name=NR_132102 | |||
|tss_classification=yes | |||
|tss_id=hg_102755.1 | |tss_id=hg_102755.1 | ||
|tss_score=1 | |||
|uniprot_id= | |||
}} | }} | ||
Revision as of 19:40, 8 March 2018
Basic information about the TSS
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| TSS cluster detected* |
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* The number of TSS cluster called studies (maximum 16)
Gene and protein annotation
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TATA-Box annotation
| Distance to TSS: | -9 |
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| Nearest PromoterID: | NR_132102 |
| Entrez ID: | 101929437 |
| Nearest Unigene: | Hs.112596 |
| Nearest Refseq: | NR_132102 |
| Nearest Ensembl: | ENSG00000236024 |
| Gene Name: | PRRX2 antisense RNA 1 |
| Gene Alias: | - |
| Gene Description: | PRRX2 antisense RNA 1 |
| Gene Type: | ncRNA |
| CpG%: | 0.01 |
| GC%: | 0.462687 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
TSS expression
Expression data not found.