TSS: Hg 102816.1: Difference between revisions
From referenceTSS
(Created page with "{{TSSDetail |cpg_percent=0.025 |distance_to_tss=-8408 |entrez_id=84929 |gc_percent=0.597015 |gene_alias=- |gene_description=fibrinogen C domain containing 1 |gene_name=FIBCD1...") |
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{{TSSDetail | {{TSSDetail | ||
|chr=chr9 | |||
|cpg_percent=0.025 | |cpg_percent=0.025 | ||
|distance= | |||
|distance_to_tss=-8408 | |distance_to_tss=-8408 | ||
|end=130947482 | |||
|entrez_id=84929 | |entrez_id=84929 | ||
|gc_percent=0.597015 | |gc_percent=0.597015 | ||
| Line 12: | Line 15: | ||
|nearest_refseq=NM_032843 | |nearest_refseq=NM_032843 | ||
|nearest_unigene=Hs.133205 | |nearest_unigene=Hs.133205 | ||
|num_trans=0 | |||
|species=human | |||
|start=130947470 | |||
|strand=- | |||
|tata_box="37(GCTTTAAGACGC,+,0.00)" | |tata_box="37(GCTTTAAGACGC,+,0.00)" | ||
|transcript_name= | |||
|tss_classification=no | |||
|tss_id=hg_102816.1 | |tss_id=hg_102816.1 | ||
|tss_score=1 | |||
}} | }} | ||
Revision as of 19:42, 8 March 2018
Basic information about the TSS
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| TSS cluster detected* |
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* The number of TSS cluster called studies (maximum 16)
Gene and protein annotation
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TATA-Box annotation
| Distance to TSS: | -8408 |
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| Nearest PromoterID: | NM_001145106 |
| Entrez ID: | 84929 |
| Nearest Unigene: | Hs.133205 |
| Nearest Refseq: | NM_032843 |
| Nearest Ensembl: | ENSG00000130720 |
| Gene Name: | FIBCD1 |
| Gene Alias: | - |
| Gene Description: | fibrinogen C domain containing 1 |
| Gene Type: | protein-coding |
| CpG%: | 0.025 |
| GC%: | 0.597015 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): | "37(GCTTTAAGACGC,+,0.00)" |