TSS: Hg 102820.1: Difference between revisions
From referenceTSS
(Created page with "{{TSSDetail |cpg_percent=0.02 |distance_to_tss=42325 |entrez_id=286336 |gc_percent=0.557214 |gene_alias=C9orf59 |gene_description=family with sequence similarity 78 member A |...") |
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{{TSSDetail | {{TSSDetail | ||
|chr=chr9 | |||
|cpg_percent=0.02 | |cpg_percent=0.02 | ||
|distance= | |||
|distance_to_tss=42325 | |distance_to_tss=42325 | ||
|end=131234196 | |||
|entrez_id=286336 | |entrez_id=286336 | ||
|gc_percent=0.557214 | |gc_percent=0.557214 | ||
| Line 12: | Line 15: | ||
|nearest_refseq=NM_033387 | |nearest_refseq=NM_033387 | ||
|nearest_unigene=Hs.143878 | |nearest_unigene=Hs.143878 | ||
|num_trans=0 | |||
|species=human | |||
|start=131234192 | |||
|strand=- | |||
|transcript_name= | |||
|tss_classification=no | |||
|tss_id=hg_102820.1 | |tss_id=hg_102820.1 | ||
|tss_score=1 | |||
}} | }} | ||
Revision as of 19:42, 8 March 2018
Basic information about the TSS
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| TSS cluster detected* |
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* The number of TSS cluster called studies (maximum 16)
Gene and protein annotation
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TATA-Box annotation
| Distance to TSS: | 42325 |
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| Nearest PromoterID: | NM_033387 |
| Entrez ID: | 286336 |
| Nearest Unigene: | Hs.143878 |
| Nearest Refseq: | NM_033387 |
| Nearest Ensembl: | ENSG00000126882 |
| Gene Name: | FAM78A |
| Gene Alias: | C9orf59 |
| Gene Description: | family with sequence similarity 78 member A |
| Gene Type: | protein-coding |
| CpG%: | 0.02 |
| GC%: | 0.557214 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |