TSS: Rfhg 152747.1: Difference between revisions

Revision as of 07:00, 7 December 2023

Basic information about the TSS

TSS ID:	rfhg_152747.1
Species:	human
Chr:	chr12

Start:	62559981
End:	62559981
Strand:	+

Source datasets

EPD

Protocol

TSS_database

TSS cluster detected^*

1

* The number of TSS cluster called data-sets (maximum 17)

cCREs annotation

Description:	-
Category:	-

* cCREs are candidates for cis regulatory elements generated from the subset of representative DNase hypersensitivity sites supported by either histone modifications or CTCF-binding data. Find more details here.

Gene and protein annotation

Nearest transcript id and distance:	ENST00000551307.5:-71 AK092646:-71
GeneID:	23041
HGNC/MGI_ID:	HGNC:29177
UniProt_ID:
Nearer transcript ids and distances:

Gene_name:	LINC01465
Gene_symbol:	MON2
Gene_synonyms:	KIAA1040
Gene_source:	HGNC:29177

TATA-Box annotation

Distance to TSS:	43453
Nearest PromoterID:	NR_121682
Entrez ID:	283416
Nearest Unigene:	Hs.375881
Nearest Refseq:	NM_175895
Nearest Ensembl:	ENSG00000221949
Gene Name:	LINC01465
Gene Alias:	C12orf61
Gene Type:	ncRNA
CpG%:	0.000000
GC%:	1.000000
TATA-Box(TBP)/Promoter/Homer Distance From Peak(sequence,strand,conservation):

TSS expression

Expression data not found.

@@ Line 21: / Line 21: @@
 |gene_type=ncRNA
 |hgnc_mgi_id=HGNC:29177
+|methods=TSS_database
 |nearest_ensembl=ENSG00000221949
 |nearest_promoter_id=NR_121682
@@ Line 27: / Line 28: @@
 |peak_score=1
 |reftss_version=4
+|source_datasets=EPD
 |species=human
 |start=62559981