TSS: Hg 102920.1: Difference between revisions
From referenceTSS
(Created page with "{{TSSDetail |cpg_percent=0.015 |distance_to_tss=-156 |entrez_id=8328 |gc_percent=0.447761 |gene_alias=BDPLT17|ZNF163B |gene_description=growth factor independent 1B transcript...") |
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{{TSSDetail | {{TSSDetail | ||
|ZNF163B= | |||
|chr=chr9 | |||
|cpg_percent=0.015 | |cpg_percent=0.015 | ||
|distance= | |||
|distance_to_tss=-156 | |distance_to_tss=-156 | ||
|end=132945404 | |||
|entrez_id=8328 | |entrez_id=8328 | ||
|gc_percent=0.447761 | |gc_percent=0.447761 | ||
| Line 12: | Line 16: | ||
|nearest_refseq=NM_004188 | |nearest_refseq=NM_004188 | ||
|nearest_unigene=Hs.553160 | |nearest_unigene=Hs.553160 | ||
|num_trans=0 | |||
|species=human | |||
|start=132945373 | |||
|strand=- | |||
|transcript_name= | |||
|tss_classification=yes | |||
|tss_id=hg_102920.1 | |tss_id=hg_102920.1 | ||
|tss_score=1 | |||
}} | }} | ||
Revision as of 19:47, 8 March 2018
Basic information about the TSS
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| TSS cluster detected* |
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* The number of TSS cluster called studies (maximum 16)
Gene and protein annotation
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TATA-Box annotation
| Distance to TSS: | -156 |
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| Nearest PromoterID: | NM_004188 |
| Entrez ID: | 8328 |
| Nearest Unigene: | Hs.553160 |
| Nearest Refseq: | NM_004188 |
| Nearest Ensembl: | ENSG00000165702 |
| Gene Name: | GFI1B |
| Gene Alias: | BDPLT17 |
| Gene Description: | growth factor independent 1B transcriptional repressor |
| Gene Type: | protein-coding |
| CpG%: | 0.015 |
| GC%: | 0.447761 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |