TSS: Hg 103335.1: Difference between revisions
From referenceTSS
(Created page with "{{TSSDetail |cpg_percent=0.02 |distance_to_tss=-118 |entrez_id=727800 |gc_percent=0.731343 |gene_alias=- |gene_description=ring finger protein 208 |gene_name=RNF208 |gene_type...") |
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{{TSSDetail | {{TSSDetail | ||
|all_trans=ENST00000391553.2:104 NM_031297:104 uc004clz.2:104 ENST00000392827.2:-125 uc064xks.1:-125 BC090061:277 AL136540:421 AF416715:423 BC016958:442 AM393547:457 | |||
|chr=chr9 | |||
|cpg_percent=0.02 | |cpg_percent=0.02 | ||
|distance=104 | |||
|distance_to_tss=-118 | |distance_to_tss=-118 | ||
|end=137221456 | |||
|entrez_id=727800 | |entrez_id=727800 | ||
|gc_percent=0.731343 | |gc_percent=0.731343 | ||
|gene_alias=- | |gene_alias=- | ||
|gene_description=ring finger protein 208 | |gene_description=ring finger protein 208 | ||
|gene_name=RNF208 | |gene_id=727800 | ||
|gene_name=ring finger protein 208 | |||
|gene_source=HGNC:25420 | |||
|gene_symbol=RNF208 | |||
|gene_synonyms=DKFZP761H1710 | |||
|gene_type=protein-coding | |gene_type=protein-coding | ||
|hgnc_mgi_id=HGNC:25420 | |||
|nearest_ensembl=ENSG00000212864 | |nearest_ensembl=ENSG00000212864 | ||
|nearest_promoter_id=NM_031297 | |nearest_promoter_id=NM_031297 | ||
|nearest_refseq=NM_031297 | |nearest_refseq=NM_031297 | ||
|nearest_unigene=Hs.512767 | |nearest_unigene=Hs.512767 | ||
|num_trans=10 | |||
|species=human | |||
|start=137221426 | |||
|strand=- | |||
|transcript_name=ENST00000391553.2 NM_031297 uc004clz.2 | |||
|tss_classification=yes | |||
|tss_id=hg_103335.1 | |tss_id=hg_103335.1 | ||
|tss_score=1 | |||
|uniprot_id=Q9H0X6 | |||
}} | }} | ||
Revision as of 20:04, 8 March 2018
Basic information about the TSS
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| TSS cluster detected* |
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* The number of TSS cluster called studies (maximum 16)
Gene and protein annotation
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TATA-Box annotation
| Distance to TSS: | -118 |
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| Nearest PromoterID: | NM_031297 |
| Entrez ID: | 727800 |
| Nearest Unigene: | Hs.512767 |
| Nearest Refseq: | NM_031297 |
| Nearest Ensembl: | ENSG00000212864 |
| Gene Name: | ring finger protein 208 |
| Gene Alias: | - |
| Gene Description: | ring finger protein 208 |
| Gene Type: | protein-coding |
| CpG%: | 0.02 |
| GC%: | 0.731343 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
TSS expression
Expression data not found.