TSS: Rfhg 80154.1: Difference between revisions
From referenceTSS
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|gene_type=ncRNA | |gene_type=ncRNA | ||
|hgnc_mgi_id=HGNC:33660 | |hgnc_mgi_id=HGNC:33660 | ||
|methods=C1CAGE | |||
|nearest_ensembl=ENSG00000216101 | |nearest_ensembl=ENSG00000216101 | ||
|nearest_promoter_id=NR_030615 | |nearest_promoter_id=NR_030615 | ||
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|peak_score=1 | |peak_score=1 | ||
|reftss_version=4 | |reftss_version=4 | ||
|source_datasets=PRJDB5282 | |||
|species=human | |species=human | ||
|start=30584286 | |start=30584286 |
Latest revision as of 02:58, 9 December 2023
Basic information about the TSS
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Source datasets | PRJDB5282 | |||||||||||||
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Protocol | C1CAGE | |||||||||||||
TSS cluster detected* | 1 |
* The number of TSS cluster called data-sets (maximum 17)
cCREs annotation
Description: | - |
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Category: | - |
* cCREs are candidates for cis regulatory elements generated from the subset of representative DNase hypersensitivity sites supported by either histone modifications or CTCF-binding data. Find more details here.
Gene and protein annotation
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TATA-Box annotation
Distance to TSS: | -38 |
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Nearest PromoterID: | NR_030615 |
Entrez ID: | 100126314 |
Nearest Unigene: | |
Nearest Refseq: | NR_030615 |
Nearest Ensembl: | ENSG00000216101 |
Gene Name: | MIR877 |
Gene Alias: | MIRN877|hsa-mir-877|miRNA877|mir-877 |
Gene Description: | microRNA 877 |
Gene Type: | ncRNA |
CpG%: | 0.000000 |
GC%: | 0.588235 |
TATA-Box(TBP)/Promoter/Homer Distance From Peak(sequence,strand,conservation): |
TSS expression
Expression data not found.