TSS: Rfhg 80154.1: Difference between revisions

Latest revision as of 02:58, 9 December 2023

Basic information about the TSS

TSS ID:	rfhg_80154.1
Species:	human
Chr:	chr6

Start:	30584286
End:	30584302
Strand:	+

Source datasets

PRJDB5282

Protocol

C1CAGE

TSS cluster detected^*

1

* The number of TSS cluster called data-sets (maximum 17)

cCREs annotation

Description:	-
Category:	-

* cCREs are candidates for cis regulatory elements generated from the subset of representative DNase hypersensitivity sites supported by either histone modifications or CTCF-binding data. Find more details here.

Gene and protein annotation

Transcript_name:	ENST00000401282.3
Distance:	30
GeneID:	100126314
HGNC/MGI_ID:	HGNC:33660
UniProt_ID:

Gene_name:	MIR877
Gene_symbol:	MIR877
Gene_synonyms:	hsa-mir-877
Gene_source:	HGNC:33660

TATA-Box annotation

Distance to TSS:	-38
Nearest PromoterID:	NR_030615
Entrez ID:	100126314
Nearest Unigene:
Nearest Refseq:	NR_030615
Nearest Ensembl:	ENSG00000216101
Gene Name:	MIR877
Gene Alias:	MIRN877\|hsa-mir-877\|miRNA877\|mir-877
Gene Description:	microRNA 877
Gene Type:	ncRNA
CpG%:	0.000000
GC%:	0.588235
TATA-Box(TBP)/Promoter/Homer Distance From Peak(sequence,strand,conservation):

TSS expression

Expression data not found.

@@ Line 21: / Line 21: @@
 |gene_type=ncRNA
 |hgnc_mgi_id=HGNC:33660
+|methods=C1CAGE
 |nearest_ensembl=ENSG00000216101
 |nearest_promoter_id=NR_030615
@@ Line 27: / Line 28: @@
 |peak_score=1
 |reftss_version=4
+|source_datasets=PRJDB5282
 |species=human
 |start=30584286