TSS: Rfhg 80802.1: Difference between revisions

Revision as of 03:11, 9 December 2023

Basic information about the TSS

TSS ID:	rfhg_80802.1
Species:	human
Chr:	chr6

Start:	31704081
End:	31704101
Strand:	-

Source datasets

PRJNA4843412

Protocol

NETCAGE

TSS cluster detected^*

1

* The number of TSS cluster called data-sets (maximum 17)

cCREs annotation

Description:	pELS (EH38D3831519,EH38E2459396)
Category:	pELS

* cCREs are candidates for cis regulatory elements generated from the subset of representative DNase hypersensitivity sites supported by either histone modifications or CTCF-binding data. Find more details here.

Gene and protein annotation

Nearest transcript id and distance:
GeneID:
HGNC/MGI_ID:
UniProt_ID:
Nearer transcript ids and distances:

Gene_name:	ABHD16A
Gene_symbol:
Gene_synonyms:
Gene_source:

TATA-Box annotation

Distance to TSS:	-767
Nearest PromoterID:	NR_033489
Entrez ID:	7920
Nearest Unigene:	Hs.388188
Nearest Refseq:	NM_021160
Nearest Ensembl:	ENSG00000204427
Gene Name:	ABHD16A
Gene Alias:	BAT5\|D6S82E\|NG26\|PP199\|hBAT5
Gene Type:	protein-coding
CpG%:	0.000000
GC%:	0.619048
TATA-Box(TBP)/Promoter/Homer Distance From Peak(sequence,strand,conservation):

@@ Line 21: / Line 21: @@
 |gene_type=protein-coding
 |hgnc_mgi_id=
+|methods=NETCAGE
 |nearest_ensembl=ENSG00000204427
 |nearest_promoter_id=NR_033489
@@ Line 27: / Line 28: @@
 |peak_score=1
 |reftss_version=4
+|source_datasets=PRJNA4843412
 |species=human
 |start=31704081