TSS: Rfhg 94464.1: Difference between revisions

Revision as of 07:23, 9 December 2023

Basic information about the TSS

TSS ID:	rfhg_94464.1
Species:	human
Chr:	chr7

Start:	47655252
End:	47655252
Strand:	+

Source datasets

EPD

Protocol

TSS_database

TSS cluster detected^*

1

* The number of TSS cluster called data-sets (maximum 17)

cCREs annotation

Description:	-
Category:	-

* cCREs are candidates for cis regulatory elements generated from the subset of representative DNase hypersensitivity sites supported by either histone modifications or CTCF-binding data. Find more details here.

Gene and protein annotation

Nearest transcript id and distance:	ENST00000408988.2:-8 AK126096:-8
GeneID:	401335
HGNC/MGI_ID:	HGNC:34432
UniProt_ID:
Nearer transcript ids and distances:

Gene_name:	C7orf65
Gene_symbol:	LINC02902
Gene_synonyms:	FLJ44108
Gene_source:	HGNC:34432

TATA-Box annotation

Distance to TSS:	8
Nearest PromoterID:	NM_001123065
Entrez ID:	401335
Nearest Unigene:	Hs.520816
Nearest Refseq:	NM_001123065
Nearest Ensembl:
Gene Name:	C7orf65
Gene Alias:	-
Gene Type:	protein-coding
CpG%:	0.000000
GC%:	0.000000
TATA-Box(TBP)/Promoter/Homer Distance From Peak(sequence,strand,conservation):

TSS expression

Expression data not found.

@@ Line 21: / Line 21: @@
 |gene_type=protein-coding
 |hgnc_mgi_id=HGNC:34432
+|methods=TSS_database
 |nearest_ensembl=
 |nearest_promoter_id=NM_001123065
@@ Line 27: / Line 28: @@
 |peak_score=1
 |reftss_version=4
+|source_datasets=EPD
 |species=human
 |start=47655252