Template: TSSDetailV4: Difference between revisions

Revision as of 20:27, 21 December 2023

Basic information about the TSS

TSS ID:	{{{tss_id}}}
Species:
Chr:

Start:
End:
Strand:

Source datasets

Protocol

TSS cluster detected^*

* The number of TSS cluster called data-sets (maximum 5)

cCREs annotation

Description:
Category:

* cCREs are candidates for cis regulatory elements generated from the subset of representative DNase hypersensitivity sites supported by either histone modifications or CTCF-binding data. Find more details here.

Gene and protein annotation

Transcript_name:
Distance:
GeneID:
HGNC/MGI_ID:
UniProt_ID:

Gene_name:
Gene_symbol:
Gene_synonyms:
Gene_source:

TATA-Box annotation

Distance to TSS:
Nearest PromoterID:
Entrez ID:
Nearest Unigene:
Nearest Refseq:
Nearest Ensembl:
Gene Name:
Gene Alias:
Gene Description:
Gene Type:
CpG%:
GC%:
TATA-Box(TBP)/Promoter/Homer Distance From Peak(sequence,strand,conservation):

@@ Line 75: / Line 75: @@
 <span class="section_head">Basic information about the TSS</span>
 <hr width="300px" size="2" style="text-align:left;margin-left:0" noshade>
-<table style="width:400px"><tr><td style="width:48%;">
+<table style="table-layout:fixed;width:100%"><tr><td style="width:28%;">
 <table class="inner" >
 <tr><th scope="row" class="item_label_long">TSS ID:</th><td>{{{tss_id}}}</td></tr>
@@ Line 81: / Line 81: @@
 <tr><th scope="row" class="item_label_long">Species:</th><td>{{{species|}}}</td></tr>
 <tr><th scope="row" class="item_label_long">Chr:</th><td>{{{chr|}}}</td></tr>
-</table></td><td style="width:4%;"></td><td style="width:48%;">
+</table></td><td style="width:4%;"></td><td style="width:68%;">
 <table class="inner" >
 <tr><th scope="row" class="item_label_middle">Start:</th><td>{{{start|}}}</td></tr>
@@ Line 88: / Line 88: @@
 </table>
 </td></tr>
-<tr style='border-bottom-style: dotted;border-bottom-width: thin;' colspan='2'><th>TSS cluster detected<sup>*</sup></th><td>{{{tss_cluster_detected|}}}</td></tr>
+<tr style='border-bottom-style: dotted;border-bottom-width: thin;vertical-align:top'><th >Source datasets</th><td colspan='2'>{{#wrapAtPipes: {{{source_datasets|}}} }}</td></tr>
+<tr style='border-bottom-style: dotted;border-bottom-width: thin;vertical-align:top'><th>Protocol</th><td colspan='2'>{{#wrapAtPipes: {{{methods|}}} }}</td></tr>
+<tr style='border-bottom-style: dotted;border-bottom-width: thin;vertical-align:top'><th>TSS cluster detected<sup>*</sup></th><td colspan='2'>{{{tss_cluster_detected|}}}</td></tr>
 </table>
-<p style='word-wrap: break-word;overflow-wrap: break-word;'><span style='font-size:0.7em;'>&nbsp;&nbsp;* The number of TSS cluster called studies (maximum {{#ifeq:{{{species|}}}|human|16|5}}) </span></p>
+<p style='word-wrap: break-word;overflow-wrap: break-word;'><span style='font-size:0.7em;'>&nbsp;&nbsp;* The number of TSS cluster called data-sets (maximum {{#ifeq:{{{species|}}}|human|17|5}}) </span></p>
 <!--
 <table class="inner" width="420px">
@@ Line 184: / Line 186: @@
 {{#set:ccre_category={{{ccre_category|}}}}}
 {{#set:reftss_version={{{reftss_version|}}}}}
+{{#set:source_datasets={{{source_datasets|}}}}}
+{{#set:methods={{{methods|}}}}}
 [[Category:TSS_IDs]]