TSS: Hg 105686.1: Difference between revisions
From referenceTSS
(Created page with "{{TSSDetail |cpg_percent=0.01 |distance_to_tss=27 |entrez_id=414243 |gc_percent=0.517413 |gene_alias=C10orf101 |gene_description=long intergenic non-protein coding RNA 595 |ge...") |
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{{TSSDetail | {{TSSDetail | ||
|all_trans=ENST00000634452.1:-7 AK126491:-7 ENST00000461034.1:17 uc057ukq.1:17 ENST00000415959.1:-21 NR_073447:-21 uc057ukp.1:-21 ENST00000634735.1:-39 ENST00000476909.1:48 uc031pwb.2:48 ENST00000459633.1:80 uc057ukr.1:80 | |||
|chr=chr10 | |||
|cpg_percent=0.01 | |cpg_percent=0.01 | ||
|distance=-7 | |||
|distance_to_tss=27 | |distance_to_tss=27 | ||
|end=78267362 | |||
|entrez_id=414243 | |entrez_id=414243 | ||
|gc_percent=0.517413 | |gc_percent=0.517413 | ||
|gene_alias=C10orf101 | |gene_alias=C10orf101 | ||
|gene_description=long intergenic non-protein coding RNA 595 | |gene_description=long intergenic non-protein coding RNA 595 | ||
|gene_name=LINC00595 | |gene_id=100132987 414243 | ||
|gene_name=long intergenic non-protein coding RNA 595; long intergenic non-protein coding RNA 856 | |||
|gene_source=HGNC:31430 HGNC:45111 | |||
|gene_symbol=LINC00595 LINC00856 | |||
|gene_synonyms= | |||
|gene_type=ncRNA | |gene_type=ncRNA | ||
|hgnc_mgi_id=HGNC:31430 HGNC:45111 | |||
|nearest_ensembl=ENSG00000230417 | |nearest_ensembl=ENSG00000230417 | ||
|nearest_promoter_id=NR_073447 | |nearest_promoter_id=NR_073447 | ||
|nearest_refseq=NR_073447 | |nearest_refseq=NR_073447 | ||
|nearest_unigene=Hs.55047 | |nearest_unigene=Hs.55047 | ||
|num_trans=12 | |||
|species=human | |||
|start=78267348 | |||
|strand=+ | |||
|transcript_name=ENST00000634452.1 AK126491 | |||
|tss_classification=no | |||
|tss_id=hg_105686.1 | |tss_id=hg_105686.1 | ||
|tss_score=1 | |||
|uniprot_id= | |||
}} | }} | ||
Revision as of 21:46, 8 March 2018
Basic information about the TSS
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| TSS cluster detected* |
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* The number of TSS cluster called studies (maximum 16)
Gene and protein annotation
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TATA-Box annotation
| Distance to TSS: | 27 |
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| Nearest PromoterID: | NR_073447 |
| Entrez ID: | 414243 |
| Nearest Unigene: | Hs.55047 |
| Nearest Refseq: | NR_073447 |
| Nearest Ensembl: | ENSG00000230417 |
| Gene Name: | long intergenic non-protein coding RNA 595; long intergenic non-protein coding RNA 856 |
| Gene Alias: | C10orf101 |
| Gene Description: | long intergenic non-protein coding RNA 595 |
| Gene Type: | ncRNA |
| CpG%: | 0.01 |
| GC%: | 0.517413 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
TSS expression
Expression data not found.