TSS: Rfhg 1.1: Difference between revisions

Revision as of 14:54, 6 November 2024

Basic information about the TSS

TSS ID:	rfhg_1.1
Species:	human
Chr:	chr1

Start:	16014
End:	16020
Strand:	-

Source datasets

DRA000914

Protocol

CAGE

TSS cluster detected^*

1

* The number of TSS cluster called data-sets (maximum 17)

cCREs annotation

Description:	-
Category:	-

* cCREs are candidates for cis regulatory elements generated from the subset of representative DNase hypersensitivity sites supported by either histone modifications or CTCF-binding data. Find more details here.

Gene and protein annotation

Nearest transcript id and distance:
GeneID:
HGNC/MGI_ID:
UniProt_ID:
Nearer transcript ids and distances:

Gene_name:	MIR6859-1
Gene_symbol:
Gene_synonyms:
Gene_source:

TATA-Box annotation

Distance to TSS:	1419
Nearest PromoterID:	NR_106918
Entrez ID:	102466751
Nearest Unigene:
Nearest Refseq:	NR_106918
Nearest Ensembl:	ENSG00000278267
Gene Name:	MIR6859-1
Gene Alias:	hsa-mir-6859-1
Gene Type:	ncRNA
CpG%:	0.000000
GC%:	0.571429
TATA-Box(TBP)/Promoter/Homer Distance From Peak(sequence,strand,conservation):

@@ Line 1: / Line 1: @@
 {{TSSDetailV4
+|all_trans=
 |annotation=intron (NR_024540, intron 8 of 10)
 |ccre_category=N
@@ Line 25: / Line 26: @@
 |nearest_promoter_id=NR_106918
 |nearest_refseq=NR_106918
+|nearest_transcripts=
 |nearest_unigene=
 |peak_score=1