TSS: Rfhg 100282.1: Difference between revisions

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{{TSSDetailV4
{{TSSDetailV4
|all_trans=
|annotation=intron (NM_001321316, intron 1 of 17)
|annotation=intron (NM_001321316, intron 1 of 17)
|ccre_category=N
|ccre_category=N
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|nearest_promoter_id=NM_013255
|nearest_promoter_id=NM_013255
|nearest_refseq=NM_013255
|nearest_refseq=NM_013255
|nearest_transcripts=
|nearest_unigene=Hs.44693
|nearest_unigene=Hs.44693
|peak_score=1
|peak_score=1

Revision as of 15:09, 6 November 2024

Basic information about the TSS

TSS ID:rfhg_100282.1
Species:human
Chr:chr7
Start:131372740
End:131372743
Strand:+
Source datasetsFANTOM5
ProtocolCAGE
TSS cluster detected*1

  * The number of TSS cluster called data-sets (maximum 17)


cCREs annotation

Description:-
Category:-

  * cCREs are candidates for cis regulatory elements generated from the subset of representative DNase hypersensitivity sites supported by either histone modifications or CTCF-binding data. Find more details here.



Gene and protein annotation

Nearest transcript id and distance:
GeneID:
HGNC/MGI_ID:
UniProt_ID:
Nearer transcript ids and distances:
    Gene_name:MKLN1
    Gene_symbol:
    Gene_synonyms:
    Gene_source:



    TATA-Box annotation

    Distance to TSS:44865
    Nearest PromoterID:NM_013255
    Entrez ID:4289
    Nearest Unigene:Hs.44693
    Nearest Refseq:NM_013255
    Nearest Ensembl:ENSG00000128585
    Gene Name:MKLN1
    Gene Alias:TWA2
    Gene Type:protein-coding
    CpG%:0.000000
    GC%:0.250000
    TATA-Box(TBP)/Promoter/Homer Distance From Peak(sequence,strand,conservation):



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