TSS: Rfhg 100583.1: Difference between revisions

Revision as of 15:24, 6 November 2024

Basic information about the TSS

TSS ID:	rfhg_100583.1
Species:	human
Chr:	chr7

Start:	135681463
End:	135681474
Strand:	-

Source datasets

FANTOM5

Protocol

CAGE

TSS cluster detected^*

1

* The number of TSS cluster called data-sets (maximum 17)

cCREs annotation

Description:	-
Category:	-

* cCREs are candidates for cis regulatory elements generated from the subset of representative DNase hypersensitivity sites supported by either histone modifications or CTCF-binding data. Find more details here.

Gene and protein annotation

Nearest transcript id and distance:
GeneID:
HGNC/MGI_ID:
UniProt_ID:
Nearer transcript ids and distances:

Gene_name:	STMP1
Gene_symbol:
Gene_synonyms:
Gene_source:

TATA-Box annotation

Distance to TSS:	18954
Nearest PromoterID:	NM_001130929
Entrez ID:	647087
Nearest Unigene:	Hs.200022
Nearest Refseq:	NM_001130929
Nearest Ensembl:	ENSG00000243317
Gene Name:	STMP1
Gene Alias:	C7orf73\|PL-5283
Gene Type:	protein-coding
CpG%:	0.000000
GC%:	0.500000
TATA-Box(TBP)/Promoter/Homer Distance From Peak(sequence,strand,conservation):

@@ Line 1: / Line 1: @@
 {{TSSDetailV4
+|all_trans=
 |annotation=3' UTR (NM_012450, exon 16 of 16)
 |ccre_category=N
@@ Line 25: / Line 26: @@
 |nearest_promoter_id=NM_001130929
 |nearest_refseq=NM_001130929
+|nearest_transcripts=
 |nearest_unigene=Hs.200022
 |peak_score=1