TSS: Rfhg 100786.1: Difference between revisions

Revision as of 15:33, 6 November 2024

Basic information about the TSS

TSS ID:	rfhg_100786.1
Species:	human
Chr:	chr7

Start:	138963834
End:	138963835
Strand:	-

Source datasets

FANTOM5

Protocol

CAGE

TSS cluster detected^*

1

* The number of TSS cluster called data-sets (maximum 17)

cCREs annotation

Description:	-
Category:	-

* cCREs are candidates for cis regulatory elements generated from the subset of representative DNase hypersensitivity sites supported by either histone modifications or CTCF-binding data. Find more details here.

Gene and protein annotation

Nearest transcript id and distance:
GeneID:
HGNC/MGI_ID:
UniProt_ID:
Nearer transcript ids and distances:

Gene_name:	KIAA1549
Gene_symbol:
Gene_synonyms:
Gene_source:

TATA-Box annotation

Distance to TSS:	17555
Nearest PromoterID:	NM_020910
Entrez ID:	57670
Nearest Unigene:	Hs.605380
Nearest Refseq:	NM_020910
Nearest Ensembl:	ENSG00000122778
Gene Name:	KIAA1549
Gene Alias:	-
Gene Type:	protein-coding
CpG%:	0.000000
GC%:	0.500000
TATA-Box(TBP)/Promoter/Homer Distance From Peak(sequence,strand,conservation):

@@ Line 1: / Line 1: @@
 {{TSSDetailV4
+|all_trans=
 |annotation=intron (NM_020910, intron 1 of 19)
 |ccre_category=N
@@ Line 25: / Line 26: @@
 |nearest_promoter_id=NM_020910
 |nearest_refseq=NM_020910
+|nearest_transcripts=
 |nearest_unigene=Hs.605380
 |peak_score=1