TSS: Rfhg 100866.1: Difference between revisions

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{{TSSDetailV4
{{TSSDetailV4
|all_trans=
|annotation=intron (NM_198508, intron 3 of 4)
|annotation=intron (NM_198508, intron 3 of 4)
|ccre_category=N
|ccre_category=N
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|nearest_promoter_id=NM_198508
|nearest_promoter_id=NM_198508
|nearest_refseq=NM_198508
|nearest_refseq=NM_198508
|nearest_transcripts=
|nearest_unigene=Hs.17572
|nearest_unigene=Hs.17572
|peak_score=1
|peak_score=1

Revision as of 15:36, 6 November 2024

Basic information about the TSS


TSS ID:rfhg_100866.1
Species:human
Chr:chr7
Start:139477534
End:139477537
Strand:-
Source datasetsPRJNA4843412
ProtocolNETCAGE
TSS cluster detected*1

  * The number of TSS cluster called data-sets (maximum 17)


cCREs annotation


Description:-
Category:-

  * cCREs are candidates for cis regulatory elements generated from the subset of representative DNase hypersensitivity sites supported by either histone modifications or CTCF-binding data. Find more details here.



Gene and protein annotation


Nearest transcript id and distance:
GeneID:
HGNC/MGI_ID:
UniProt_ID:
Nearer transcript ids and distances:
    Gene_name:KLRG2
    Gene_symbol:
    Gene_synonyms:
    Gene_source:



    TATA-Box annotation


    Distance to TSS:6138
    Nearest PromoterID:NM_198508
    Entrez ID:346689
    Nearest Unigene:Hs.17572
    Nearest Refseq:NM_198508
    Nearest Ensembl:ENSG00000188883
    Gene Name:KLRG2
    Gene Alias:CLEC15B
    Gene Type:protein-coding
    CpG%:0.000000
    GC%:0.250000
    TATA-Box(TBP)/Promoter/Homer Distance From Peak(sequence,strand,conservation):