TSS: Rfhg 100977.1: Difference between revisions
From referenceTSS
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{{TSSDetailV4 | {{TSSDetailV4 | ||
|all_trans= | |||
|annotation=Intergenic | |annotation=Intergenic | ||
|ccre_category=dELS | |ccre_category=dELS | ||
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|nearest_promoter_id=NR_156490 | |nearest_promoter_id=NR_156490 | ||
|nearest_refseq=NM_032295 | |nearest_refseq=NM_032295 | ||
|nearest_transcripts= | |||
|nearest_unigene=Hs.446021 | |nearest_unigene=Hs.446021 | ||
|peak_score=1 | |peak_score=1 |
Revision as of 15:40, 6 November 2024
Basic information about the TSS
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Source datasets | FANTOM5 | |||||||||||||
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Protocol | CAGE | |||||||||||||
TSS cluster detected* | 1 |
* The number of TSS cluster called data-sets (maximum 17)
cCREs annotation
Description: | dELS (EH38D4039350,EH38E2596295) |
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Category: | dELS |
* cCREs are candidates for cis regulatory elements generated from the subset of representative DNase hypersensitivity sites supported by either histone modifications or CTCF-binding data. Find more details here.
Gene and protein annotation
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TATA-Box annotation
Distance to TSS: | 80822 |
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Nearest PromoterID: | NR_156490 |
Entrez ID: | 84255 |
Nearest Unigene: | Hs.446021 |
Nearest Refseq: | NM_032295 |
Nearest Ensembl: | ENSG00000157800 |
Gene Name: | SLC37A3 |
Gene Alias: | - |
Gene Type: | protein-coding |
CpG%: | 0.000000 |
GC%: | 0.444444 |
TATA-Box(TBP)/Promoter/Homer Distance From Peak(sequence,strand,conservation): |