TSS: Rfhg 101388.1: Difference between revisions

Revision as of 15:50, 6 November 2024

Basic information about the TSS

TSS ID:	rfhg_101388.1
Species:	human
Chr:	chr7

Start:	142786001
End:	142786024
Strand:	+

Source datasets

FANTOM5

Protocol

CAGE

TSS cluster detected^*

1

* The number of TSS cluster called data-sets (maximum 17)

cCREs annotation

Description:	pELS (EH38D4041330,EH38E2597711)
Category:	pELS

* cCREs are candidates for cis regulatory elements generated from the subset of representative DNase hypersensitivity sites supported by either histone modifications or CTCF-binding data. Find more details here.

Gene and protein annotation

Nearest transcript id and distance:	AK128384:-13
GeneID:
HGNC/MGI_ID:
UniProt_ID:
Nearer transcript ids and distances:	LT601549:-64 S81224:189 AB305830:388 view more...

Gene_name:	PRSS2
Gene_symbol:
Gene_synonyms:
Gene_source:

TATA-Box annotation

Distance to TSS:	15042
Nearest PromoterID:	NM_002770
Entrez ID:	5645
Nearest Unigene:	Hs.449281
Nearest Refseq:	NM_002770
Nearest Ensembl:	ENSG00000275896
Gene Name:	PRSS2
Gene Alias:	TRY2\|TRY8\|TRYP2
Gene Type:	protein-coding
CpG%:	0.000000
GC%:	0.416667
TATA-Box(TBP)/Promoter/Homer Distance From Peak(sequence,strand,conservation):

@@ Line 1: / Line 1: @@
 {{TSSDetailV4
+|all_trans=AK128384:-13 LT601549:-64 S81224:189 AB305830:388
 |annotation=intron (NM_001130026, intron 10 of 10)
 |ccre_category=pELS
@@ Line 25: / Line 26: @@
 |nearest_promoter_id=NM_002770
 |nearest_refseq=NM_002770
+|nearest_transcripts=LT601549:-64 S81224:189 AB305830:388
 |nearest_unigene=Hs.449281
 |peak_score=1