TSS: Rfhg 101626.1: Difference between revisions
From referenceTSS
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{{TSSDetailV4 | {{TSSDetailV4 | ||
|all_trans=ENST00000332690.1:114 NM_177437.1:114 AB529260:114 KJ896044:114 KJ905657:114 BC100938:114 BC100939:114 BC100940:114 BC100941:114 | |||
|annotation=promoter-TSS (NM_177437) | |annotation=promoter-TSS (NM_177437) | ||
|ccre_category=N | |ccre_category=N | ||
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|nearest_promoter_id=NM_177437 | |nearest_promoter_id=NM_177437 | ||
|nearest_refseq=NM_177437 | |nearest_refseq=NM_177437 | ||
|nearest_transcripts= | |||
|nearest_unigene=Hs.688222 | |nearest_unigene=Hs.688222 | ||
|peak_score=1 | |peak_score=1 | ||
| Line 33: | Line 35: | ||
|strand=+ | |strand=+ | ||
|tata_box= | |tata_box= | ||
|transcript_name=ENST00000332690.1 AB529260 BC100938 BC100939 BC100940 BC100941 | |transcript_name=ENST00000332690.1 NM_177437.1 AB529260 KJ896044 KJ905657 BC100938 BC100939 BC100940 BC100941 | ||
|tss_cluster_detected=1 | |tss_cluster_detected=1 | ||
|tss_id=rfhg_101626.1 | |tss_id=rfhg_101626.1 | ||
Revision as of 15:58, 6 November 2024
Basic information about the TSS
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| Source datasets | EPD | |||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Protocol | TSS_database | |||||||||||||
| TSS cluster detected* | 1 | |||||||||||||
* The number of TSS cluster called data-sets (maximum 17)
cCREs annotation
| Description: | - |
|---|---|
| Category: | - |
* cCREs are candidates for cis regulatory elements generated from the subset of representative DNase hypersensitivity sites supported by either histone modifications or CTCF-binding data. Find more details here.
Gene and protein annotation
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TATA-Box annotation
| Distance to TSS: | -114 |
|---|---|
| Nearest PromoterID: | NM_177437 |
| Entrez ID: | 338398 |
| Nearest Unigene: | Hs.688222 |
| Nearest Refseq: | NM_177437 |
| Nearest Ensembl: | ENSG00000185899 |
| Gene Name: | TAS2R60 |
| Gene Alias: | T2R56|T2R60 |
| Gene Type: | protein-coding |
| CpG%: | 0.000000 |
| GC%: | 1.000000 |
| TATA-Box(TBP)/Promoter/Homer Distance From Peak(sequence,strand,conservation): |
TSS expression
Expression data not found.