TSS: Rfhg 101741.1: Difference between revisions
From referenceTSS
No edit summary |
No edit summary |
||
| Line 1: | Line 1: | ||
{{TSSDetailV4 | {{TSSDetailV4 | ||
|all_trans=ENST00000307003.3:0 NM_145304.4:0 JF432437:155 KJ895810:155 BC021251:-196 | |||
|annotation=promoter-TSS (NM_145304) | |annotation=promoter-TSS (NM_145304) | ||
|ccre_category=N | |ccre_category=N | ||
| Line 25: | Line 26: | ||
|nearest_promoter_id=NM_145304 | |nearest_promoter_id=NM_145304 | ||
|nearest_refseq=NM_145304 | |nearest_refseq=NM_145304 | ||
|nearest_transcripts=JF432437:155 KJ895810:155 BC021251:-196 | |||
|nearest_unigene=Hs.352212 | |nearest_unigene=Hs.352212 | ||
|peak_score=1 | |peak_score=1 | ||
| Line 33: | Line 35: | ||
|strand=+ | |strand=+ | ||
|tata_box= | |tata_box= | ||
|transcript_name=ENST00000307003.3 | |transcript_name=ENST00000307003.3 NM_145304.4 | ||
|tss_cluster_detected=1 | |tss_cluster_detected=1 | ||
|tss_id=rfhg_101741.1 | |tss_id=rfhg_101741.1 | ||
Revision as of 16:03, 6 November 2024
Basic information about the TSS
|
| |||||||||||||
| Source datasets | FANTOM5 | |||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Protocol | CAGE | |||||||||||||
| TSS cluster detected* | 1 | |||||||||||||
* The number of TSS cluster called data-sets (maximum 17)
cCREs annotation
| Description: | - |
|---|---|
| Category: | - |
* cCREs are candidates for cis regulatory elements generated from the subset of representative DNase hypersensitivity sites supported by either histone modifications or CTCF-binding data. Find more details here.
Gene and protein annotation
|
|
TATA-Box annotation
| Distance to TSS: | 0 |
|---|---|
| Nearest PromoterID: | NM_145304 |
| Entrez ID: | 202865 |
| Nearest Unigene: | Hs.352212 |
| Nearest Refseq: | NM_145304 |
| Nearest Ensembl: | ENSG00000170279 |
| Gene Name: | C7orf33 |
| Gene Alias: | - |
| Gene Type: | protein-coding |
| CpG%: | 0.000000 |
| GC%: | 0.272727 |
| TATA-Box(TBP)/Promoter/Homer Distance From Peak(sequence,strand,conservation): |
TSS expression
Expression data not found.