TSS: Rfhg 101753.1: Difference between revisions

Revision as of 16:03, 6 November 2024

Basic information about the TSS

TSS ID:	rfhg_101753.1
Species:	human
Chr:	chr7

Start:	148729961
End:	148729961
Strand:	+

Source datasets

EPD

Protocol

TSS_database

TSS cluster detected^*

1

* The number of TSS cluster called data-sets (maximum 17)

cCREs annotation

Description:	-
Category:	-

* cCREs are candidates for cis regulatory elements generated from the subset of representative DNase hypersensitivity sites supported by either histone modifications or CTCF-binding data. Find more details here.

Gene and protein annotation

Nearest transcript id and distance:	LF362045:16 MA597622:16
GeneID:
HGNC/MGI_ID:
UniProt_ID:
Nearer transcript ids and distances:	ENST00000617797.1:38 AF062536:42 U58087:42 AM393444:158 AM393566:158 AB587475:162 ENST00000660013.1:218 view more...

Gene_name:	CUL1
Gene_symbol:
Gene_synonyms:
Gene_source:

TATA-Box annotation

Distance to TSS:	30251
Nearest PromoterID:	NM_001370664
Entrez ID:	8454
Nearest Unigene:	Hs.146806
Nearest Refseq:	NM_003592
Nearest Ensembl:	ENSG00000055130
Gene Name:	CUL1
Gene Alias:	-
Gene Type:	protein-coding
CpG%:	0.000000
GC%:	1.000000
TATA-Box(TBP)/Promoter/Homer Distance From Peak(sequence,strand,conservation):

@@ Line 1: / Line 1: @@
 {{TSSDetailV4
+|all_trans=LF362045:16 MA597622:16 ENST00000617797.1:38 AF062536:42 U58087:42 AM393444:158 AM393566:158 AB587475:162 ENST00000660013.1:218
 |annotation=intron (NM_001370664, intron 1 of 21)
 |ccre_category=N
@@ Line 25: / Line 26: @@
 |nearest_promoter_id=NM_001370664
 |nearest_refseq=NM_003592
+|nearest_transcripts=ENST00000617797.1:38 AF062536:42 U58087:42 AM393444:158 AM393566:158 AB587475:162 ENST00000660013.1:218
 |nearest_unigene=Hs.146806
 |peak_score=1