TSS: Rfhg 101827.1: Difference between revisions

Revision as of 16:05, 6 November 2024

Basic information about the TSS

TSS ID:	rfhg_101827.1
Species:	human
Chr:	chr7

Start:	149460913
End:	149460913
Strand:	-

Source datasets

EPD

Protocol

TSS_database

TSS cluster detected^*

1

* The number of TSS cluster called data-sets (maximum 17)

cCREs annotation

Description:	PLS,CTCF-bound (EH38D4045391,EH38E2600078)
Category:	PLS

* cCREs are candidates for cis regulatory elements generated from the subset of representative DNase hypersensitivity sites supported by either histone modifications or CTCF-binding data. Find more details here.

Gene and protein annotation

Nearest transcript id and distance:	AB033111:37
GeneID:
HGNC/MGI_ID:
UniProt_ID:
Nearer transcript ids and distances:	ENST00000247930.5:-149 NM_015694.3:-149 view more...

Gene_name:	ZNF777
Gene_symbol:
Gene_synonyms:
Gene_source:

TATA-Box annotation

Distance to TSS:	149
Nearest PromoterID:	NM_015694
Entrez ID:	27153
Nearest Unigene:	Hs.38512
Nearest Refseq:	NM_015694
Nearest Ensembl:	ENSG00000196453
Gene Name:	ZNF777
Gene Alias:	-
Gene Type:	protein-coding
CpG%:	0.000000
GC%:	0.000000
TATA-Box(TBP)/Promoter/Homer Distance From Peak(sequence,strand,conservation):

@@ Line 1: / Line 1: @@
 {{TSSDetailV4
+|all_trans=AB033111:37 ENST00000247930.5:-149 NM_015694.3:-149
 |annotation=5' UTR (NM_015694, exon 1 of 6)
 |ccre_category=PLS
@@ Line 25: / Line 26: @@
 |nearest_promoter_id=NM_015694
 |nearest_refseq=NM_015694
+|nearest_transcripts=ENST00000247930.5:-149 NM_015694.3:-149
 |nearest_unigene=Hs.38512
 |peak_score=1