TSS: Rfhg 102241.1: Difference between revisions

Revision as of 16:24, 6 November 2024

Basic information about the TSS

TSS ID:	rfhg_102241.1
Species:	human
Chr:	chr7

Start:	151409230
End:	151409278
Strand:	+

Source datasets

FANTOM5

Protocol

CAGE

TSS cluster detected^*

1

* The number of TSS cluster called data-sets (maximum 17)

cCREs annotation

Description:	-
Category:	-

* cCREs are candidates for cis regulatory elements generated from the subset of representative DNase hypersensitivity sites supported by either histone modifications or CTCF-binding data. Find more details here.

Gene and protein annotation

Nearest transcript id and distance:	ENST00000480632.5:0 ENST00000466677.1:0 AK095986:0
GeneID:	100131176
HGNC/MGI_ID:	HGNC:41186
UniProt_ID:
Nearer transcript ids and distances:	BC043579:7 BC128098:36 ENST00000489632.5:-69 NR_034013.2:-69 NR_034012.2:-69 NR_109857.1:-69 view more...

Gene_name:	WDR86-AS1
Gene_symbol:	WDR86-AS1
Gene_synonyms:
Gene_source:	HGNC:41186

TATA-Box annotation

Distance to TSS:	93
Nearest PromoterID:	NR_109857
Entrez ID:	100131176
Nearest Unigene:	Hs.659231
Nearest Refseq:	NR_034012
Nearest Ensembl:	ENSG00000243836
Gene Name:	WDR86-AS1
Gene Alias:	-
Gene Type:	ncRNA
CpG%:	0.041667
GC%:	0.673469
TATA-Box(TBP)/Promoter/Homer Distance From Peak(sequence,strand,conservation):

TSS expression

Expression data not found.

@@ Line 1: / Line 1: @@
 {{TSSDetailV4
+|all_trans=ENST00000480632.5:0 ENST00000466677.1:0 AK095986:0 BC043579:7 BC128098:36 ENST00000489632.5:-69 NR_034013.2:-69 NR_034012.2:-69 NR_109857.1:-69
 |annotation=promoter-TSS (NR_034012)
 |ccre_category=N
@@ Line 25: / Line 26: @@
 |nearest_promoter_id=NR_109857
 |nearest_refseq=NR_034012
+|nearest_transcripts=BC043579:7 BC128098:36 ENST00000489632.5:-69 NR_034013.2:-69 NR_034012.2:-69 NR_109857.1:-69
 |nearest_unigene=Hs.659231
 |peak_score=1