TSS: Rfhg 114269.1: Difference between revisions
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{{TSSDetailV4 | {{TSSDetailV4 | ||
|all_trans= | |||
|annotation=promoter-TSS (NM_001354575) | |annotation=promoter-TSS (NM_001354575) | ||
|ccre_category=dELS | |ccre_category=dELS | ||
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|nearest_promoter_id=NM_001354574 | |nearest_promoter_id=NM_001354574 | ||
|nearest_refseq=NM_152570 | |nearest_refseq=NM_152570 | ||
|nearest_transcripts= | |||
|nearest_unigene=Hs.444665 | |nearest_unigene=Hs.444665 | ||
|peak_score=1 | |peak_score=1 |
Revision as of 01:00, 7 November 2024
Basic information about the TSS
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Source datasets | EPD | |||||||||||||
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Protocol | TSS_database | |||||||||||||
TSS cluster detected* | 1 |
* The number of TSS cluster called data-sets (maximum 17)
cCREs annotation
Description: | dELS,CTCF-bound (EH38D4183874,EH38E2689372) |
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Category: | dELS |
* cCREs are candidates for cis regulatory elements generated from the subset of representative DNase hypersensitivity sites supported by either histone modifications or CTCF-binding data. Find more details here.
Gene and protein annotation
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TATA-Box annotation
Distance to TSS: | 626 |
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Nearest PromoterID: | NM_001354574 |
Entrez ID: | 158038 |
Nearest Unigene: | Hs.444665 |
Nearest Refseq: | NM_152570 |
Nearest Ensembl: | ENSG00000174482 |
Gene Name: | LINGO2 |
Gene Alias: | LERN3|LRRN6C |
Gene Type: | protein-coding |
CpG%: | 0.000000 |
GC%: | 1.000000 |
TATA-Box(TBP)/Promoter/Homer Distance From Peak(sequence,strand,conservation): |