TSS: Rfhg 115599.1: Difference between revisions

Revision as of 01:54, 7 November 2024

Basic information about the TSS

TSS ID:	rfhg_115599.1
Species:	human
Chr:	chr9

Start:	72577753
End:	72577753
Strand:	+

Source datasets

EPD

Protocol

TSS_database

TSS cluster detected^*

1

* The number of TSS cluster called data-sets (maximum 17)

cCREs annotation

Description:	dELS (EH38D4195445,EH38E2696910)
Category:	dELS

* cCREs are candidates for cis regulatory elements generated from the subset of representative DNase hypersensitivity sites supported by either histone modifications or CTCF-binding data. Find more details here.

Gene and protein annotation

Nearest transcript id and distance:	ENST00000497073.1:35 ENST00000645208.2:35
GeneID:	117531
HGNC/MGI_ID:	HGNC:16513
UniProt_ID:	Q8TDI8
Nearer transcript ids and distances:	ENST00000646244.1:167 ENST00000645053.1:169 ENST00000645773.1:186 AK307461:186 ENST00000650689.1:-362 ENST00000651183.1:-384 ENST00000651743.1:-412 view more...

Gene_name:	TMC1
Gene_symbol:	TMC1
Gene_synonyms:
Gene_source:	HGNC:16513

TATA-Box annotation

Distance to TSS:	55952
Nearest PromoterID:	NM_138691
Entrez ID:	117531
Nearest Unigene:	Hs.670211
Nearest Refseq:	NM_138691
Nearest Ensembl:	ENSG00000165091
Gene Name:	TMC1
Gene Alias:	DFNA36\|DFNB11\|DFNB7
Gene Type:	protein-coding
CpG%:	0.000000
GC%:	0.000000
TATA-Box(TBP)/Promoter/Homer Distance From Peak(sequence,strand,conservation):

TSS expression

Expression data not found.

@@ Line 1: / Line 1: @@
 {{TSSDetailV4
+|all_trans=ENST00000497073.1:35 ENST00000645208.2:35 ENST00000646244.1:167 ENST00000645053.1:169 ENST00000645773.1:186 AK307461:186 ENST00000650689.1:-362 ENST00000651183.1:-384 ENST00000651743.1:-412
 |annotation=intron (NM_138691, intron 1 of 23)
 |ccre_category=dELS
@@ Line 25: / Line 26: @@
 |nearest_promoter_id=NM_138691
 |nearest_refseq=NM_138691
+|nearest_transcripts=ENST00000646244.1:167 ENST00000645053.1:169 ENST00000645773.1:186 AK307461:186 ENST00000650689.1:-362 ENST00000651183.1:-384 ENST00000651743.1:-412
 |nearest_unigene=Hs.670211
 |peak_score=1