TSS: Rfhg 120213.1: Difference between revisions
From referenceTSS
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{{TSSDetailV4 | {{TSSDetailV4 | ||
|all_trans=BC041566:23 BC001325:-25 ENST00000487406.2:-31 BC015184:283 | |||
|annotation=exon (NM_003934, exon 9 of 19) | |annotation=exon (NM_003934, exon 9 of 19) | ||
|ccre_category=N | |ccre_category=N | ||
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|nearest_promoter_id=NR_106915 | |nearest_promoter_id=NR_106915 | ||
|nearest_refseq=NR_106915 | |nearest_refseq=NR_106915 | ||
|nearest_transcripts=BC001325:-25 ENST00000487406.2:-31 BC015184:283 | |||
|nearest_unigene= | |nearest_unigene= | ||
|peak_score=1 | |peak_score=1 | ||
Revision as of 05:15, 7 November 2024
Basic information about the TSS
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| Source datasets | PRJNA4843412 | |||||||||||||
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| Protocol | NETCAGE | |||||||||||||
| TSS cluster detected* | 1 | |||||||||||||
* The number of TSS cluster called data-sets (maximum 17)
cCREs annotation
| Description: | - |
|---|---|
| Category: | - |
* cCREs are candidates for cis regulatory elements generated from the subset of representative DNase hypersensitivity sites supported by either histone modifications or CTCF-binding data. Find more details here.
Gene and protein annotation
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TATA-Box annotation
| Distance to TSS: | -5849 |
|---|---|
| Nearest PromoterID: | NR_106915 |
| Entrez ID: | 102465515 |
| Nearest Unigene: | |
| Nearest Refseq: | NR_106915 |
| Nearest Ensembl: | ENSG00000277713 |
| Gene Name: | MIR6856 |
| Gene Alias: | hsa-mir-6856 |
| Gene Type: | ncRNA |
| CpG%: | 0.000000 |
| GC%: | 0.625000 |
| TATA-Box(TBP)/Promoter/Homer Distance From Peak(sequence,strand,conservation): |
TSS expression
Expression data not found.