TSS: Rfhg 127621.1: Difference between revisions
From referenceTSS
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{{TSSDetailV4 | {{TSSDetailV4 | ||
|all_trans=ENST00000372199.5:12 ENST00000372198.5:12 NM_001270042.2:12 NR_070309.2:12 NR_070308.2:12 BC018606:12 ENST00000372197.5:26 BC007374:26 | |||
|annotation=promoter-TSS (NM_001270042) | |annotation=promoter-TSS (NM_001270042) | ||
|ccre_category=N | |ccre_category=N | ||
| Line 25: | Line 26: | ||
|nearest_promoter_id=NR_070308 | |nearest_promoter_id=NR_070308 | ||
|nearest_refseq=NM_032372 | |nearest_refseq=NM_032372 | ||
|nearest_transcripts=ENST00000372197.5:26 BC007374:26 | |||
|nearest_unigene=Hs.741500 | |nearest_unigene=Hs.741500 | ||
|peak_score=1 | |peak_score=1 | ||
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|strand=+ | |strand=+ | ||
|tata_box= | |tata_box= | ||
|transcript_name=ENST00000372199.5 ENST00000372198.5 BC018606 | |transcript_name=ENST00000372199.5 ENST00000372198.5 NM_001270042.2 NR_070309.2 NR_070308.2 BC018606 | ||
|tss_cluster_detected=1 | |tss_cluster_detected=1 | ||
|tss_id=rfhg_127621.1 | |tss_id=rfhg_127621.1 | ||
Revision as of 10:19, 7 November 2024
Basic information about the TSS
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| Source datasets | EPD | |||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Protocol | TSS_database | |||||||||||||
| TSS cluster detected* | 1 | |||||||||||||
* The number of TSS cluster called data-sets (maximum 17)
cCREs annotation
| Description: | - |
|---|---|
| Category: | - |
* cCREs are candidates for cis regulatory elements generated from the subset of representative DNase hypersensitivity sites supported by either histone modifications or CTCF-binding data. Find more details here.
Gene and protein annotation
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TATA-Box annotation
| Distance to TSS: | -12 |
|---|---|
| Nearest PromoterID: | NR_070308 |
| Entrez ID: | 84332 |
| Nearest Unigene: | Hs.741500 |
| Nearest Refseq: | NM_032372 |
| Nearest Ensembl: | ENSG00000133665 |
| Gene Name: | DYDC2 |
| Gene Alias: | - |
| Gene Type: | protein-coding |
| CpG%: | 0.000000 |
| GC%: | 1.000000 |
| TATA-Box(TBP)/Promoter/Homer Distance From Peak(sequence,strand,conservation): |
TSS expression
Expression data not found.