TSS: Rfhg 127632.1: Difference between revisions
From referenceTSS
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{{TSSDetailV4 | {{TSSDetailV4 | ||
|all_trans=ENST00000256039.3:0 NM_001270041.2:0 NM_032372.6:0 ENST00000411538.5:-3 ENST00000616870.4:-8 AK093378:8 ENST00000444807.6:-479 | |||
|annotation=promoter-TSS (NM_001270041) | |annotation=promoter-TSS (NM_001270041) | ||
|ccre_category=PLS | |ccre_category=PLS | ||
| Line 25: | Line 26: | ||
|nearest_promoter_id=NM_032372 | |nearest_promoter_id=NM_032372 | ||
|nearest_refseq=NM_032372 | |nearest_refseq=NM_032372 | ||
|nearest_transcripts=ENST00000411538.5:-3 ENST00000616870.4:-8 AK093378:8 ENST00000444807.6:-479 | |||
|nearest_unigene=Hs.741500 | |nearest_unigene=Hs.741500 | ||
|peak_score=1 | |peak_score=1 | ||
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|strand=+ | |strand=+ | ||
|tata_box= | |tata_box= | ||
|transcript_name=ENST00000256039.3 | |transcript_name=ENST00000256039.3 NM_001270041.2 NM_032372.6 | ||
|tss_cluster_detected=1 | |tss_cluster_detected=1 | ||
|tss_id=rfhg_127632.1 | |tss_id=rfhg_127632.1 | ||
Revision as of 10:20, 7 November 2024
Basic information about the TSS
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| Source datasets | FANTOM5 | |||||||||||||
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| Protocol | CAGE | |||||||||||||
| TSS cluster detected* | 1 | |||||||||||||
* The number of TSS cluster called data-sets (maximum 17)
cCREs annotation
| Description: | PLS,CTCF-bound (EH38D2366752,EH38E1483174) |
|---|---|
| Category: | PLS |
* cCREs are candidates for cis regulatory elements generated from the subset of representative DNase hypersensitivity sites supported by either histone modifications or CTCF-binding data. Find more details here.
Gene and protein annotation
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TATA-Box annotation
| Distance to TSS: | 4 |
|---|---|
| Nearest PromoterID: | NM_032372 |
| Entrez ID: | 84332 |
| Nearest Unigene: | Hs.741500 |
| Nearest Refseq: | NM_032372 |
| Nearest Ensembl: | ENSG00000133665 |
| Gene Name: | DYDC2 |
| Gene Alias: | - |
| Gene Type: | protein-coding |
| CpG%: | 0.000000 |
| GC%: | 0.631579 |
| TATA-Box(TBP)/Promoter/Homer Distance From Peak(sequence,strand,conservation): |
TSS expression
Expression data not found.