TSS: Rfhg 133170.1: Difference between revisions

Revision as of 14:39, 7 November 2024

Basic information about the TSS

TSS ID:	rfhg_133170.1
Species:	human
Chr:	chr11

Start:	2158376
End:	2158391
Strand:	-

Source datasets

FANTOM5|EPD

Protocol

CAGE|TSS_database

TSS cluster detected^*

2

* The number of TSS cluster called data-sets (maximum 17)

cCREs annotation

Description:	dELS (EH38D2414785,EH38E1515128)
Category:	dELS

* cCREs are candidates for cis regulatory elements generated from the subset of representative DNase hypersensitivity sites supported by either histone modifications or CTCF-binding data. Find more details here.

Gene and protein annotation

Nearest transcript id and distance:	ENST00000481781.2:0
GeneID:
HGNC/MGI_ID:
UniProt_ID:
Nearer transcript ids and distances:	ENST00000476874.1:40 X06259:52 view more...

Gene_name:	INS
Gene_symbol:
Gene_synonyms:
Gene_source:

TATA-Box annotation

Distance to TSS:	2826
Nearest PromoterID:	NM_001185098
Entrez ID:	3630
Nearest Unigene:	Hs.272259
Nearest Refseq:	NM_000207
Nearest Ensembl:	ENSG00000254647
Gene Name:	INS
Gene Alias:	IDDM\|IDDM1\|IDDM2\|ILPR\|IRDN\|MODY10
Gene Type:	protein-coding
CpG%:	0.133333
GC%:	0.750000
TATA-Box(TBP)/Promoter/Homer Distance From Peak(sequence,strand,conservation):

@@ Line 1: / Line 1: @@
 {{TSSDetailV4
+|all_trans=ENST00000481781.2:0 ENST00000476874.1:40 X06259:52
 |annotation=intron (NR_003512, intron 2 of 6)
 |ccre_category=dELS
@@ Line 25: / Line 26: @@
 |nearest_promoter_id=NM_001185098
 |nearest_refseq=NM_000207
+|nearest_transcripts=ENST00000476874.1:40 X06259:52
 |nearest_unigene=Hs.272259
 |peak_score=1