TSS: Rfhg 145457.1: Difference between revisions

Revision as of 01:07, 8 November 2024

Basic information about the TSS

TSS ID:	rfhg_145457.1
Species:	human
Chr:	chr11

Start:	134275640
End:	134275650
Strand:	+

Source datasets

FANTOM5

Protocol

CAGE

TSS cluster detected^*

1

* The number of TSS cluster called data-sets (maximum 17)

cCREs annotation

Description:	pELS (EH38D2518440,EH38E1584638)
Category:	pELS

* cCREs are candidates for cis regulatory elements generated from the subset of representative DNase hypersensitivity sites supported by either histone modifications or CTCF-binding data. Find more details here.

Gene and protein annotation

Nearest transcript id and distance:
GeneID:
HGNC/MGI_ID:
UniProt_ID:
Nearer transcript ids and distances:

Gene_name:	GLB1L3
Gene_symbol:
Gene_synonyms:
Gene_source:

TATA-Box annotation

Distance to TSS:	-734
Nearest PromoterID:	NM_001080407
Entrez ID:	112937
Nearest Unigene:	Hs.721382
Nearest Refseq:	NM_138416
Nearest Ensembl:	ENSG00000166105
Gene Name:	GLB1L3
Gene Alias:	-
Gene Type:	protein-coding
CpG%:	0.100000
GC%:	0.272727
TATA-Box(TBP)/Promoter/Homer Distance From Peak(sequence,strand,conservation):

@@ Line 1: / Line 1: @@
 {{TSSDetailV4
+|all_trans=
 |annotation=promoter-TSS (NM_001080407)
 |ccre_category=pELS
@@ Line 25: / Line 26: @@
 |nearest_promoter_id=NM_001080407
 |nearest_refseq=NM_138416
+|nearest_transcripts=
 |nearest_unigene=Hs.721382
 |peak_score=1