TSS: Rfhg 171287.1: Difference between revisions

Revision as of 15:48, 8 November 2024

Basic information about the TSS

TSS ID:	rfhg_171287.1
Species:	human
Chr:	chr14

Start:	105899425
End:	105899462
Strand:	+

Source datasets

FANTOM5

Protocol

CAGE

TSS cluster detected^*

1

* The number of TSS cluster called data-sets (maximum 17)

cCREs annotation

Description:	pELS (EH38D2766361,EH38E1747172)
Category:	pELS

* cCREs are candidates for cis regulatory elements generated from the subset of representative DNase hypersensitivity sites supported by either histone modifications or CTCF-binding data. Find more details here.

Gene and protein annotation

Nearest transcript id and distance:
GeneID:
HGNC/MGI_ID:
UniProt_ID:
Nearer transcript ids and distances:

Gene_name:	FAM30A
Gene_symbol:
Gene_synonyms:
Gene_source:

TATA-Box annotation

Distance to TSS:	-18536
Nearest PromoterID:	NR_026800
Entrez ID:	9834
Nearest Unigene:	Hs.649259
Nearest Refseq:	NM_014151
Nearest Ensembl:	ENSG00000226777
Gene Name:	FAM30A
Gene Alias:	C14orf110\|HSPC053\|KIAA0125
Gene Type:	ncRNA
CpG%:	0.000000
GC%:	0.526316
TATA-Box(TBP)/Promoter/Homer Distance From Peak(sequence,strand,conservation):

@@ Line 1: / Line 1: @@
 {{TSSDetailV4
+|all_trans=
 |annotation=Intergenic
 |ccre_category=pELS
@@ Line 25: / Line 26: @@
 |nearest_promoter_id=NR_026800
 |nearest_refseq=NM_014151
+|nearest_transcripts=
 |nearest_unigene=Hs.649259
 |peak_score=1