TSS: Rfhg 176458.1: Difference between revisions
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{{TSSDetailV4 | {{TSSDetailV4 | ||
|all_trans=ENST00000564137.5:0 ENST00000499217.6:0 NR_120377.1:0 NR_038449.1:0 NR_038448.1:0 BC014373:0 ENST00000657781.1:9 ENST00000664892.1:28 ENST00000567286.5:37 ENST00000666989.1:37 ENST00000659591.1:37 ENST00000564621.2:37 ENST00000568853.1:74 AF085896:90 ENST00000670462.1:140 BC121819:331 | |||
|annotation=promoter-TSS (NM_201265) | |annotation=promoter-TSS (NM_201265) | ||
|ccre_category=PLS | |ccre_category=PLS | ||
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|nearest_promoter_id=NR_038448 | |nearest_promoter_id=NR_038448 | ||
|nearest_refseq=NR_038448 | |nearest_refseq=NR_038448 | ||
|nearest_transcripts=ENST00000657781.1:9 ENST00000664892.1:28 ENST00000567286.5:37 ENST00000666989.1:37 ENST00000659591.1:37 ENST00000564621.2:37 ENST00000568853.1:74 AF085896:90 ENST00000670462.1:140 BC121819:331 | |||
|nearest_unigene=Hs.611046 | |nearest_unigene=Hs.611046 | ||
|peak_score=1 | |peak_score=1 | ||
| Line 33: | Line 35: | ||
|strand=+ | |strand=+ | ||
|tata_box= | |tata_box= | ||
|transcript_name=ENST00000564137.5 ENST00000499217.6 BC014373 | |transcript_name=ENST00000564137.5 ENST00000499217.6 NR_120377.1 NR_038449.1 NR_038448.1 BC014373 | ||
|tss_cluster_detected=1 | |tss_cluster_detected=1 | ||
|tss_id=rfhg_176458.1 | |tss_id=rfhg_176458.1 | ||
Revision as of 12:02, 11 November 2024
Basic information about the TSS
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| Source datasets | FANTOM5 | |||||||||||||
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| Protocol | CAGE | |||||||||||||
| TSS cluster detected* | 1 | |||||||||||||
* The number of TSS cluster called data-sets (maximum 17)
cCREs annotation
| Description: | PLS,CTCF-bound (EH38D2809920,EH38E1777703) |
|---|---|
| Category: | PLS |
* cCREs are candidates for cis regulatory elements generated from the subset of representative DNase hypersensitivity sites supported by either histone modifications or CTCF-binding data. Find more details here.
Gene and protein annotation
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TATA-Box annotation
| Distance to TSS: | 0 |
|---|---|
| Nearest PromoterID: | NR_038448 |
| Entrez ID: | 440288 |
| Nearest Unigene: | Hs.611046 |
| Nearest Refseq: | NR_038448 |
| Nearest Ensembl: | ENSG00000247240 |
| Gene Name: | UBL7-AS1 |
| Gene Alias: | - |
| Gene Type: | ncRNA |
| CpG%: | 0.100000 |
| GC%: | 0.636364 |
| TATA-Box(TBP)/Promoter/Homer Distance From Peak(sequence,strand,conservation): |
TSS expression
Expression data not found.