TSS: Rfhg 178882.1: Difference between revisions

Revision as of 12:47, 11 November 2024

Basic information about the TSS

TSS ID:	rfhg_178882.1
Species:	human
Chr:	chr15

Start:	99276064
End:	99276078
Strand:	+

Source datasets

FANTOM5

Protocol

CAGE

TSS cluster detected^*

1

* The number of TSS cluster called data-sets (maximum 17)

cCREs annotation

Description:	dELS (EH38D2831502,EH38E1792449)
Category:	dELS

* cCREs are candidates for cis regulatory elements generated from the subset of representative DNase hypersensitivity sites supported by either histone modifications or CTCF-binding data. Find more details here.

Gene and protein annotation

Nearest transcript id and distance:
GeneID:
HGNC/MGI_ID:
UniProt_ID:
Nearer transcript ids and distances:

Gene_name:	HSP90B2P
Gene_symbol:
Gene_synonyms:
Gene_source:

TATA-Box annotation

Distance to TSS:	18546
Nearest PromoterID:	NR_073383
Entrez ID:	7190
Nearest Unigene:	Hs.656611
Nearest Refseq:	NR_073383
Nearest Ensembl:	ENSG00000259706
Gene Name:	HSP90B2P
Gene Alias:	GRP94P1\|GRP94b\|HSP\|HSPCP2\|TRA1P1\|TRAP1
Gene Type:	pseudo
CpG%:	0.000000
GC%:	0.400000
TATA-Box(TBP)/Promoter/Homer Distance From Peak(sequence,strand,conservation):

@@ Line 1: / Line 1: @@
 {{TSSDetailV4
+|all_trans=
 |annotation=intron (NR_135755, intron 2 of 8)
 |ccre_category=dELS
@@ Line 25: / Line 26: @@
 |nearest_promoter_id=NR_073383
 |nearest_refseq=NR_073383
+|nearest_transcripts=
 |nearest_unigene=Hs.656611
 |peak_score=1