TSS: Rfhg 189392.1: Difference between revisions
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{{TSSDetailV4 | {{TSSDetailV4 | ||
|all_trans= | |||
|annotation=exon (NM_001678, exon 1 of 7) | |annotation=exon (NM_001678, exon 1 of 7) | ||
|ccre_category=pELS | |ccre_category=pELS | ||
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|nearest_promoter_id=NM_001678 | |nearest_promoter_id=NM_001678 | ||
|nearest_refseq=NM_001678 | |nearest_refseq=NM_001678 | ||
|nearest_transcripts= | |||
|nearest_unigene=Hs.643540 | |nearest_unigene=Hs.643540 | ||
|peak_score=1 | |peak_score=1 |
Revision as of 16:01, 11 November 2024
Basic information about the TSS
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Source datasets | FANTOM5 | |||||||||||||
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Protocol | CAGE | |||||||||||||
TSS cluster detected* | 1 |
* The number of TSS cluster called data-sets (maximum 17)
cCREs annotation
Description: | pELS,CTCF-bound (EH38D2906143,EH38E1844573) |
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Category: | pELS |
* cCREs are candidates for cis regulatory elements generated from the subset of representative DNase hypersensitivity sites supported by either histone modifications or CTCF-binding data. Find more details here.
Gene and protein annotation
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TATA-Box annotation
Distance to TSS: | 650 |
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Nearest PromoterID: | NM_001678 |
Entrez ID: | 482 |
Nearest Unigene: | Hs.643540 |
Nearest Refseq: | NM_001678 |
Nearest Ensembl: | ENSG00000129244 |
Gene Name: | ATP1B2 |
Gene Alias: | AMOG |
Gene Type: | protein-coding |
CpG%: | 0.142857 |
GC%: | 0.500000 |
TATA-Box(TBP)/Promoter/Homer Distance From Peak(sequence,strand,conservation): |