TSS: Rfhg 207234.1: Difference between revisions

Revision as of 21:33, 11 November 2024

Basic information about the TSS

TSS ID:	rfhg_207234.1
Species:	human
Chr:	chr19

Start:	9363162
End:	9363162
Strand:	+

Source datasets

EPD

Protocol

TSS_database

TSS cluster detected^*

1

* The number of TSS cluster called data-sets (maximum 17)

cCREs annotation

Description:	PLS (EH38D3039917,EH38E1937639)
Category:	PLS

* cCREs are candidates for cis regulatory elements generated from the subset of representative DNase hypersensitivity sites supported by either histone modifications or CTCF-binding data. Find more details here.

Gene and protein annotation

Nearest transcript id and distance:	ENST00000592912.5:-131
GeneID:	7730
HGNC/MGI_ID:	HGNC:12966
UniProt_ID:	K7EQU1
Nearer transcript ids and distances:	ENST00000343499.8:-142 U37263:-142 ENST00000683217.1:-149 NM_001384658.1:-149 NM_001172651.2:-149 NM_003451.3:-149 view more...

Gene_name:	ZNF177
Gene_symbol:	ZNF177
Gene_synonyms:
Gene_source:	HGNC:12966

TATA-Box annotation

Distance to TSS:	149
Nearest PromoterID:	NM_003451
Entrez ID:	7730
Nearest Unigene:	Hs.728944
Nearest Refseq:	NM_003451
Nearest Ensembl:	ENSG00000188629
Gene Name:	ZNF177
Gene Alias:	PIGX
Gene Type:	protein-coding
CpG%:	0.000000
GC%:	0.000000
TATA-Box(TBP)/Promoter/Homer Distance From Peak(sequence,strand,conservation):

TSS expression

Expression data not found.

@@ Line 1: / Line 1: @@
 {{TSSDetailV4
+|all_trans=ENST00000592912.5:-131 ENST00000343499.8:-142 U37263:-142 ENST00000683217.1:-149 NM_001384658.1:-149 NM_001172651.2:-149 NM_003451.3:-149
 |annotation=intron (NM_003451, intron 1 of 8)
 |ccre_category=PLS
@@ Line 25: / Line 26: @@
 |nearest_promoter_id=NM_003451
 |nearest_refseq=NM_003451
+|nearest_transcripts=ENST00000343499.8:-142 U37263:-142 ENST00000683217.1:-149 NM_001384658.1:-149 NM_001172651.2:-149 NM_003451.3:-149
 |nearest_unigene=Hs.728944
 |peak_score=1