TSS: Rfhg 212399.1: Difference between revisions

Revision as of 23:08, 11 November 2024

Basic information about the TSS

TSS ID:	rfhg_212399.1
Species:	human
Chr:	chr19

Start:	41263783
End:	41263805
Strand:	-

Source datasets

FANTOM5

Protocol

CAGE

TSS cluster detected^*

1

* The number of TSS cluster called data-sets (maximum 17)

cCREs annotation

Description:	pELS,CTCF-bound (EH38D3062649,EH38E1954648)
Category:	pELS

* cCREs are candidates for cis regulatory elements generated from the subset of representative DNase hypersensitivity sites supported by either histone modifications or CTCF-binding data. Find more details here.

Gene and protein annotation

Nearest transcript id and distance:
GeneID:
HGNC/MGI_ID:
UniProt_ID:
Nearer transcript ids and distances:

Gene_name:	HNRNPUL1
Gene_symbol:
Gene_synonyms:
Gene_source:

TATA-Box annotation

Distance to TSS:	-578
Nearest PromoterID:	NM_001321208
Entrez ID:	11100
Nearest Unigene:	Hs.155218
Nearest Refseq:	NM_007040
Nearest Ensembl:	ENSG00000105323
Gene Name:	HNRNPUL1
Gene Alias:	E1B-AP5\|E1BAP5\|HNRPUL1
Gene Type:	protein-coding
CpG%:	0.045455
GC%:	0.434783
TATA-Box(TBP)/Promoter/Homer Distance From Peak(sequence,strand,conservation):

@@ Line 1: / Line 1: @@
 {{TSSDetailV4
+|all_trans=
 |annotation=promoter-TSS (NM_001321208)
 |ccre_category=pELS
@@ Line 25: / Line 26: @@
 |nearest_promoter_id=NM_001321208
 |nearest_refseq=NM_007040
+|nearest_transcripts=
 |nearest_unigene=Hs.155218
 |peak_score=1