TSS: Rfhg 216287.1: Difference between revisions

Revision as of 00:22, 12 November 2024

Basic information about the TSS

TSS ID:	rfhg_216287.1
Species:	human
Chr:	chr19

Start:	55159304
End:	55159315
Strand:	+

Source datasets

FANTOM5

Protocol

CAGE

TSS cluster detected^*

1

* The number of TSS cluster called data-sets (maximum 17)

cCREs annotation

Description:	pELS,CTCF-bound (EH38D3075136,EH38E1964584)
Category:	pELS

* cCREs are candidates for cis regulatory elements generated from the subset of representative DNase hypersensitivity sites supported by either histone modifications or CTCF-binding data. Find more details here.

Gene and protein annotation

Nearest transcript id and distance:	ENST00000591665.1:-365 AK097618:-365
GeneID:	101930593
HGNC/MGI_ID:	HGNC:55292
UniProt_ID:
Nearer transcript ids and distances:

Gene_name:	TNNI3
Gene_symbol:	DNAAF3-AS1
Gene_synonyms:
Gene_source:	HGNC:55292

TATA-Box annotation

Distance to TSS:	-1577
Nearest PromoterID:	NM_000363
Entrez ID:	7137
Nearest Unigene:	Hs.709179
Nearest Refseq:	NM_000363
Nearest Ensembl:	ENSG00000129991
Gene Name:	TNNI3
Gene Alias:	CMD1FF\|CMD2A\|CMH7\|RCM1\|TNNC1\|cTnI
Gene Type:	protein-coding
CpG%:	0.000000
GC%:	0.500000
TATA-Box(TBP)/Promoter/Homer Distance From Peak(sequence,strand,conservation):

TSS expression

Expression data not found.

@@ Line 1: / Line 1: @@
 {{TSSDetailV4
+|all_trans=ENST00000591665.1:-365 AK097618:-365
 |annotation=exon (NM_001256714, exon 12 of 12)
 |ccre_category=pELS
@@ Line 25: / Line 26: @@
 |nearest_promoter_id=NM_000363
 |nearest_refseq=NM_000363
+|nearest_transcripts=
 |nearest_unigene=Hs.709179
 |peak_score=1