TSS: Rfhg 225440.1: Difference between revisions

Revision as of 02:58, 12 November 2024

Basic information about the TSS

TSS ID:	rfhg_225440.1
Species:	human
Chr:	chr21

Start:	32495121
End:	32495121
Strand:	-

Source datasets

PRJDB5282

Protocol

C1CAGE

TSS cluster detected^*

1

* The number of TSS cluster called data-sets (maximum 17)

cCREs annotation

Description:	pELS (EH38D3335532,EH38E2137407)
Category:	pELS

* cCREs are candidates for cis regulatory elements generated from the subset of representative DNase hypersensitivity sites supported by either histone modifications or CTCF-binding data. Find more details here.

Gene and protein annotation

Nearest transcript id and distance:
GeneID:
HGNC/MGI_ID:
UniProt_ID:
Nearer transcript ids and distances:

Gene_name:	EVA1C
Gene_symbol:
Gene_synonyms:
Gene_source:

TATA-Box annotation

Distance to TSS:	82415
Nearest PromoterID:	NM_001286556
Entrez ID:	59271
Nearest Unigene:	Hs.208358
Nearest Refseq:	NM_058187
Nearest Ensembl:	ENSG00000166979
Gene Name:	EVA1C
Gene Alias:	B18\|B19\|C21orf63\|C21orf64\|FAM176C\|PRED34\|SUE21
Gene Type:	protein-coding
CpG%:	0.000000
GC%:	1.000000
TATA-Box(TBP)/Promoter/Homer Distance From Peak(sequence,strand,conservation):

@@ Line 1: / Line 1: @@
 {{TSSDetailV4
+|all_trans=
 |annotation=exon (NM_001320744, exon 3 of 6)
 |ccre_category=pELS
@@ Line 25: / Line 26: @@
 |nearest_promoter_id=NM_001286556
 |nearest_refseq=NM_058187
+|nearest_transcripts=
 |nearest_unigene=Hs.208358
 |peak_score=1