TSS: Rfhg 233796.1: Difference between revisions

Revision as of 05:21, 12 November 2024

Basic information about the TSS

TSS ID:	rfhg_233796.1
Species:	human
Chr:	chrX

Start:	3066827
End:	3066827
Strand:	+

Source datasets

EPD

Protocol

TSS_database

TSS cluster detected^*

1

* The number of TSS cluster called data-sets (maximum 17)

cCREs annotation

Description:	PLS (EH38D4256616,EH38E2739846)
Category:	PLS

* cCREs are candidates for cis regulatory elements generated from the subset of representative DNase hypersensitivity sites supported by either histone modifications or CTCF-binding data. Find more details here.

Gene and protein annotation

Nearest transcript id and distance:	ENST00000359361.2:6 X97868:6
GeneID:	416
HGNC/MGI_ID:	HGNC:721
UniProt_ID:	P54793
Nearer transcript ids and distances:	NM_004042.5:-28

Gene_name:	ARSF
Gene_symbol:	ARSF
Gene_synonyms:	ASF
Gene_source:	HGNC:721

TATA-Box annotation

Distance to TSS:	28
Nearest PromoterID:	NM_004042
Entrez ID:	416
Nearest Unigene:	Hs.101674
Nearest Refseq:	NM_004042
Nearest Ensembl:	ENSG00000062096
Gene Name:	ARSF
Gene Alias:	ASF
Gene Type:	protein-coding
CpG%:	0.000000
GC%:	1.000000
TATA-Box(TBP)/Promoter/Homer Distance From Peak(sequence,strand,conservation):

TSS expression

Expression data not found.

@@ Line 1: / Line 1: @@
 {{TSSDetailV4
+|all_trans=ENST00000359361.2:6 X97868:6 NM_004042.5:-28
 |annotation=promoter-TSS (NM_004042)
 |ccre_category=PLS
@@ Line 25: / Line 26: @@
 |nearest_promoter_id=NM_004042
 |nearest_refseq=NM_004042
+|nearest_transcripts=NM_004042.5:-28
 |nearest_unigene=Hs.101674
 |peak_score=1