TSS: Rfhg 237795.1: Difference between revisions

Revision as of 06:33, 12 November 2024

Basic information about the TSS

TSS ID:	rfhg_237795.1
Species:	human
Chr:	chrX

Start:	102746030
End:	102746030
Strand:	+

Source datasets

EPD

Protocol

TSS_database

TSS cluster detected^*

1

* The number of TSS cluster called data-sets (maximum 17)

cCREs annotation

Description:	PLS,CTCF-bound (EH38D4298761,EH38E2762043)
Category:	PLS

* cCREs are candidates for cis regulatory elements generated from the subset of representative DNase hypersensitivity sites supported by either histone modifications or CTCF-binding data. Find more details here.

Gene and protein annotation

Nearest transcript id and distance:	ENST00000447531.5:-51 ENST00000448867.1:-51 NM_001142530.1:-51 NM_001142529.1:-51
GeneID:	80823
HGNC/MGI_ID:	HGNC:29353
UniProt_ID:	Q6PI77
Nearer transcript ids and distances:	ENST00000372735.1:64

Gene_name:	BHLHB9
Gene_symbol:	GPRASP3
Gene_synonyms:	GASP3 KIAA1701 p60TRP
Gene_source:	HGNC:29353

TATA-Box annotation

Distance to TSS:	51
Nearest PromoterID:	NM_001142530
Entrez ID:	80823
Nearest Unigene:	Hs.4276
Nearest Refseq:	NM_030639
Nearest Ensembl:	ENSG00000198908
Gene Name:	BHLHB9
Gene Alias:	GASP3\|p60TRP
Gene Type:	protein-coding
CpG%:	0.000000
GC%:	0.000000
TATA-Box(TBP)/Promoter/Homer Distance From Peak(sequence,strand,conservation):

TSS expression

Expression data not found.

@@ Line 1: / Line 1: @@
 {{TSSDetailV4
+|all_trans=ENST00000447531.5:-51 ENST00000448867.1:-51 NM_001142530.1:-51 NM_001142529.1:-51 ENST00000372735.1:64
 |annotation=promoter-TSS (NM_001142529)
 |ccre_category=PLS
@@ Line 25: / Line 26: @@
 |nearest_promoter_id=NM_001142530
 |nearest_refseq=NM_030639
+|nearest_transcripts=ENST00000372735.1:64
 |nearest_unigene=Hs.4276
 |peak_score=1
@@ Line 33: / Line 35: @@
 |strand=+
 |tata_box=
-|transcript_name=ENST00000447531.5 ENST00000448867.1
+|transcript_name=ENST00000447531.5 ENST00000448867.1 NM_001142530.1 NM_001142529.1
 |tss_cluster_detected=1
 |tss_id=rfhg_237795.1