TSS: Rfhg 237797.1: Difference between revisions

Revision as of 06:33, 12 November 2024

Basic information about the TSS

TSS ID:	rfhg_237797.1
Species:	human
Chr:	chrX

Start:	102748709
End:	102748709
Strand:	+

Source datasets

FANTOM5

Protocol

CAGE

TSS cluster detected^*

1

* The number of TSS cluster called data-sets (maximum 17)

cCREs annotation

Description:	-
Category:	-

* cCREs are candidates for cis regulatory elements generated from the subset of representative DNase hypersensitivity sites supported by either histone modifications or CTCF-binding data. Find more details here.

Gene and protein annotation

Nearest transcript id and distance:	AB384263:283
GeneID:	80823
HGNC/MGI_ID:	HGNC:29353
UniProt_ID:
Nearer transcript ids and distances:	AF547055:284 KJ904893:286 view more...

Gene_name:	BHLHB9
Gene_symbol:	GPRASP3
Gene_synonyms:	GASP3 KIAA1701 p60TRP
Gene_source:	HGNC:29353

TATA-Box annotation

Distance to TSS:	2730
Nearest PromoterID:	NM_001142530
Entrez ID:	80823
Nearest Unigene:	Hs.4276
Nearest Refseq:	NM_030639
Nearest Ensembl:	ENSG00000198908
Gene Name:	BHLHB9
Gene Alias:	GASP3\|p60TRP
Gene Type:	protein-coding
CpG%:	0.000000
GC%:	0.000000
TATA-Box(TBP)/Promoter/Homer Distance From Peak(sequence,strand,conservation):

TSS expression

Expression data not found.

@@ Line 1: / Line 1: @@
 {{TSSDetailV4
+|all_trans=AB384263:283 AF547055:284 KJ904893:286
 |annotation=5' UTR (NM_001142526, exon 4 of 4)
 |ccre_category=N
@@ Line 25: / Line 26: @@
 |nearest_promoter_id=NM_001142530
 |nearest_refseq=NM_030639
+|nearest_transcripts=AF547055:284 KJ904893:286
 |nearest_unigene=Hs.4276
 |peak_score=1