TSS: Rfhg 34660.1: Difference between revisions

Revision as of 10:43, 12 November 2024

Basic information about the TSS

TSS ID:	rfhg_34660.1
Species:	human
Chr:	chr2

Start:	170966702
End:	170966702
Strand:	-

Source datasets

PRJDB5282

Protocol

C1CAGE

TSS cluster detected^*

1

* The number of TSS cluster called data-sets (maximum 17)

cCREs annotation

Description:	-
Category:	-

* cCREs are candidates for cis regulatory elements generated from the subset of representative DNase hypersensitivity sites supported by either histone modifications or CTCF-binding data. Find more details here.

Gene and protein annotation

Nearest transcript id and distance:	LF383698:-431 MA619275:-431
GeneID:
HGNC/MGI_ID:
UniProt_ID:
Nearer transcript ids and distances:

Gene_name:	GORASP2
Gene_symbol:
Gene_synonyms:
Gene_source:

TATA-Box annotation

Distance to TSS:	37449
Nearest PromoterID:	NM_015530
Entrez ID:	26003
Nearest Unigene:	Hs.431317
Nearest Refseq:	NM_015530
Nearest Ensembl:	ENSG00000115806
Gene Name:	GORASP2
Gene Alias:	GOLPH6\|GRASP55\|GRS2\|p59
Gene Type:	protein-coding
CpG%:	0.000000
GC%:	0.000000
TATA-Box(TBP)/Promoter/Homer Distance From Peak(sequence,strand,conservation):

@@ Line 1: / Line 1: @@
 {{TSSDetailV4
+|all_trans=LF383698:-431 MA619275:-431
 |annotation=3' UTR (NM_015530, exon 10 of 10)
 |ccre_category=N
@@ Line 25: / Line 26: @@
 |nearest_promoter_id=NM_015530
 |nearest_refseq=NM_015530
+|nearest_transcripts=
 |nearest_unigene=Hs.431317
 |peak_score=1