TSS: Rfhg 81636.1: Difference between revisions

Revision as of 01:15, 13 November 2024

Basic information about the TSS

TSS ID:	rfhg_81636.1
Species:	human
Chr:	chr6

Start:	33711440
End:	33711456
Strand:	-

Source datasets

FANTOM5

Protocol

CAGE

TSS cluster detected^*

1

* The number of TSS cluster called data-sets (maximum 17)

cCREs annotation

Description:	pELS,CTCF-bound (EH38D3833531,EH38E2460909)
Category:	pELS

* cCREs are candidates for cis regulatory elements generated from the subset of representative DNase hypersensitivity sites supported by either histone modifications or CTCF-binding data. Find more details here.

Gene and protein annotation

Nearest transcript id and distance:	LF340897:-91 MA576474:-91
GeneID:
HGNC/MGI_ID:
UniProt_ID:
Nearer transcript ids and distances:	EF139858:-203 AF086234:-217 ENST00000374231.8:-228 KJ894970:-230 ENST00000607484.6:-244 NM_032340.4:-244 AK311835:-244 LF210759:-269 MA446336:-269 ENST00000374214.3:-271 AY568085:-271 BC006007:-271 view more...

Gene_name:	UQCC2
Gene_symbol:
Gene_synonyms:
Gene_source:

TATA-Box annotation

Distance to TSS:	252
Nearest PromoterID:	NM_032340
Entrez ID:	84300
Nearest Unigene:	Hs.732448
Nearest Refseq:	NM_032340
Nearest Ensembl:	ENSG00000137288
Gene Name:	UQCC2
Gene Alias:	C6orf125\|C6orf126\|Cbp6\|M19\|MC3DN7\|MNF1\|bA6B20.2
Gene Type:	protein-coding
CpG%:	0.125000
GC%:	0.705882
TATA-Box(TBP)/Promoter/Homer Distance From Peak(sequence,strand,conservation):

@@ Line 1: / Line 1: @@
 {{TSSDetailV4
+|all_trans=LF340897:-91 MA576474:-91 EF139858:-203 AF086234:-217 ENST00000374231.8:-228 KJ894970:-230 ENST00000607484.6:-244 NM_032340.4:-244 AK311835:-244 LF210759:-269 MA446336:-269 ENST00000374214.3:-271 AY568085:-271 BC006007:-271
 |annotation=intron (NM_032340, intron 1 of 3)
 |ccre_category=pELS
@@ Line 25: / Line 26: @@
 |nearest_promoter_id=NM_032340
 |nearest_refseq=NM_032340
+|nearest_transcripts=EF139858:-203 AF086234:-217 ENST00000374231.8:-228 KJ894970:-230 ENST00000607484.6:-244 NM_032340.4:-244 AK311835:-244 LF210759:-269 MA446336:-269 ENST00000374214.3:-271 AY568085:-271 BC006007:-271
 |nearest_unigene=Hs.732448
 |peak_score=1