TSS: Rfhg 83194.1: Difference between revisions

Revision as of 01:44, 13 November 2024

Basic information about the TSS

TSS ID:	rfhg_83194.1
Species:	human
Chr:	chr6

Start:	44932696
End:	44932702
Strand:	-

Source datasets

FANTOM5

Protocol

CAGE

TSS cluster detected^*

1

* The number of TSS cluster called data-sets (maximum 17)

cCREs annotation

Description:	dELS,CTCF-bound (EH38D3845251,EH38E2469843)
Category:	dELS

* cCREs are candidates for cis regulatory elements generated from the subset of representative DNase hypersensitivity sites supported by either histone modifications or CTCF-binding data. Find more details here.

Gene and protein annotation

Nearest transcript id and distance:
GeneID:
HGNC/MGI_ID:
UniProt_ID:
Nearer transcript ids and distances:

Gene_name:	MIR586
Gene_symbol:
Gene_synonyms:
Gene_source:

TATA-Box annotation

Distance to TSS:	265071
Nearest PromoterID:	NR_030313
Entrez ID:	693171
Nearest Unigene:
Nearest Refseq:	NR_030313
Nearest Ensembl:	ENSG00000207769
Gene Name:	MIR586
Gene Alias:	MIRN586\|hsa-mir-586
Gene Type:	ncRNA
CpG%:	0.000000
GC%:	0.571429
TATA-Box(TBP)/Promoter/Homer Distance From Peak(sequence,strand,conservation):

@@ Line 1: / Line 1: @@
 {{TSSDetailV4
+|all_trans=
 |annotation=non-coding (NR_146633, exon 10 of 12)
 |ccre_category=dELS
@@ Line 25: / Line 26: @@
 |nearest_promoter_id=NR_030313
 |nearest_refseq=NR_030313
+|nearest_transcripts=
 |nearest_unigene=
 |peak_score=1