TSS: Rfhg 95927.1: Difference between revisions

Revision as of 05:36, 13 November 2024

Basic information about the TSS

TSS ID:	rfhg_95927.1
Species:	human
Chr:	chr7

Start:	80636905
End:	80636954
Strand:	+

Source datasets

FANTOM5

Protocol

CAGE

TSS cluster detected^*

1

* The number of TSS cluster called data-sets (maximum 17)

cCREs annotation

Description:	pELS (EH38D3994201,EH38E2566736)
Category:	pELS

* cCREs are candidates for cis regulatory elements generated from the subset of representative DNase hypersensitivity sites supported by either histone modifications or CTCF-binding data. Find more details here.

Gene and protein annotation

Nearest transcript id and distance:
GeneID:
HGNC/MGI_ID:
UniProt_ID:
Nearer transcript ids and distances:

Gene_name:	CD36
Gene_symbol:
Gene_synonyms:
Gene_source:

TATA-Box annotation

Distance to TSS:	-1587
Nearest PromoterID:	NM_001001548
Entrez ID:	948
Nearest Unigene:	Hs.120949
Nearest Refseq:	NM_000072
Nearest Ensembl:	ENSG00000135218
Gene Name:	CD36
Gene Alias:	BDPLT10\|CHDS7\|FAT\|GP3B\|GP4\|GPIV\|PASIV\|SCARB3
Gene Type:	protein-coding
CpG%:	0.000000
GC%:	0.420000
TATA-Box(TBP)/Promoter/Homer Distance From Peak(sequence,strand,conservation):

@@ Line 1: / Line 1: @@
 {{TSSDetailV4
+|all_trans=
 |annotation=intron (NM_001371077, intron 1 of 14)
 |ccre_category=pELS
@@ Line 25: / Line 26: @@
 |nearest_promoter_id=NM_001001548
 |nearest_refseq=NM_000072
+|nearest_transcripts=
 |nearest_unigene=Hs.120949
 |peak_score=1