TSS: Rfhg 9704.1: Difference between revisions

Revision as of 05:57, 13 November 2024

Basic information about the TSS

TSS ID:	rfhg_9704.1
Species:	human
Chr:	chr1

Start:	94795829
End:	94795842
Strand:	+

Source datasets

FANTOM5

Protocol

CAGE

TSS cluster detected^*

1

* The number of TSS cluster called data-sets (maximum 17)

cCREs annotation

Description:	dELS (EH38D2199414,EH38E1369334)
Category:	dELS

* cCREs are candidates for cis regulatory elements generated from the subset of representative DNase hypersensitivity sites supported by either histone modifications or CTCF-binding data. Find more details here.

Gene and protein annotation

Nearest transcript id and distance:
GeneID:
HGNC/MGI_ID:
UniProt_ID:
Nearer transcript ids and distances:

Gene_name:	SLC44A3-AS1
Gene_symbol:
Gene_synonyms:
Gene_source:

TATA-Box annotation

Distance to TSS:	24397
Nearest PromoterID:	NR_160779
Entrez ID:	101928079
Nearest Unigene:	Hs.596857
Nearest Refseq:	NR_104131
Nearest Ensembl:	ENSG00000224081
Gene Name:	SLC44A3-AS1
Gene Alias:	LINC01057\|XLOC_000303
Gene Type:	ncRNA
CpG%:	0.000000
GC%:	0.428571
TATA-Box(TBP)/Promoter/Homer Distance From Peak(sequence,strand,conservation):

@@ Line 1: / Line 1: @@
 {{TSSDetailV4
+|all_trans=
 |annotation=intron (NR_160783, intron 1 of 3)
 |ccre_category=dELS
@@ Line 25: / Line 26: @@
 |nearest_promoter_id=NR_160779
 |nearest_refseq=NR_104131
+|nearest_transcripts=
 |nearest_unigene=Hs.596857
 |peak_score=1